Can't import genomicranges with Python 3.11

[nleroy917]

Overview

Hello - excited about this library!

I was attempting to do some testing/experimenting and I currently run Python 3.11.4, but I was running into an import error with numpy.

Steps to reproduce

1. Install fresh virtual environment with python 3.11:

pyenv local 3.11.4
python -m venv venv
source venv/bin/activate

2. Install GenomicRanges

pip install genomicranges

3. Attempt import:

import genomicranges

4. Observe error

File "__init__.pxd", line 944, in numpy.import_array
ImportError: numpy.core.multiarray failed to import

To resolve

I can resolve this by just downgrading python to 3.10.

Additional information

It seems like numpy only supports python 3.11 in 1.23.3 and up. I see this package has it pinned to 1.22.1. Is it possible to bump numpy to >1.23.3? Or just unpin it?

Let me know if you need any more information!

Nathan

[jkanche]

Thanks for reporting this, I've gotten down to the real issue that forced me to pin the versions.