From 390c29dd2ce6ec03ce7dc4359c76f7c22f827c40 Mon Sep 17 00:00:00 2001 From: jClugstor Date: Fri, 21 Mar 2025 15:18:36 -0400 Subject: [PATCH] bump version of ODE for stiff benchmarks --- benchmarks/StiffODE/Manifest.toml | 1354 +++++++++++++++++------------ benchmarks/StiffODE/Project.toml | 2 +- 2 files changed, 803 insertions(+), 553 deletions(-) diff --git a/benchmarks/StiffODE/Manifest.toml b/benchmarks/StiffODE/Manifest.toml index 5f72f8bce..fe3c8263e 100644 --- a/benchmarks/StiffODE/Manifest.toml +++ b/benchmarks/StiffODE/Manifest.toml @@ -1,17 +1,18 @@ # This file is machine-generated - editing it directly is not advised -julia_version = "1.10.4" +julia_version = "1.11.3" manifest_format = "2.0" -project_hash = "a783217153d5e083b649eb4bd2273b52588c75ca" +project_hash = "80796edcb95bfedab219a7900610d980b95e0678" [[deps.ADTypes]] -git-tree-sha1 = "99a6f5d0ce1c7c6afdb759daa30226f71c54f6b0" +git-tree-sha1 = "e2478490447631aedba0823d4d7a80b2cc8cdb32" uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" -version = "1.7.1" -weakdeps = ["ChainRulesCore", "EnzymeCore"] +version = "1.14.0" +weakdeps = ["ChainRulesCore", "ConstructionBase", "EnzymeCore"] [deps.ADTypes.extensions] ADTypesChainRulesCoreExt = "ChainRulesCore" + ADTypesConstructionBaseExt = "ConstructionBase" ADTypesEnzymeCoreExt = "EnzymeCore" [[deps.ANSIColoredPrinters]] @@ -36,41 +37,45 @@ uuid = "1520ce14-60c1-5f80-bbc7-55ef81b5835c" version = "0.4.5" [[deps.Accessors]] -deps = ["CompositionsBase", "ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "MacroTools", "Markdown", "Test"] -git-tree-sha1 = "f61b15be1d76846c0ce31d3fcfac5380ae53db6a" +deps = ["CompositionsBase", "ConstructionBase", "Dates", "InverseFunctions", "MacroTools"] +git-tree-sha1 = "3b86719127f50670efe356bc11073d84b4ed7a5d" uuid = "7d9f7c33-5ae7-4f3b-8dc6-eff91059b697" -version = "0.1.37" +version = "0.1.42" [deps.Accessors.extensions] - AccessorsAxisKeysExt = "AxisKeys" - AccessorsIntervalSetsExt = "IntervalSets" - AccessorsStaticArraysExt = "StaticArrays" - AccessorsStructArraysExt = "StructArrays" - AccessorsUnitfulExt = "Unitful" + AxisKeysExt = "AxisKeys" + IntervalSetsExt = "IntervalSets" + LinearAlgebraExt = "LinearAlgebra" + StaticArraysExt = "StaticArrays" + StructArraysExt = "StructArrays" + TestExt = "Test" + UnitfulExt = "Unitful" [deps.Accessors.weakdeps] AxisKeys = "94b1ba4f-4ee9-5380-92f1-94cde586c3c5" IntervalSets = "8197267c-284f-5f27-9208-e0e47529a953" - Requires = "ae029012-a4dd-5104-9daa-d747884805df" + LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" StaticArrays = "90137ffa-7385-5640-81b9-e52037218182" StructArrays = "09ab397b-f2b6-538f-b94a-2f83cf4a842a" + Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40" Unitful = "1986cc42-f94f-5a68-af5c-568840ba703d" [[deps.Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "6a55b747d1812e699320963ffde36f1ebdda4099" +git-tree-sha1 = "f7817e2e585aa6d924fd714df1e2a84be7896c60" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "4.0.4" -weakdeps = ["StaticArrays"] +version = "4.3.0" +weakdeps = ["SparseArrays", "StaticArrays"] [deps.Adapt.extensions] + AdaptSparseArraysExt = "SparseArrays" AdaptStaticArraysExt = "StaticArrays" [[deps.AlgebraicMultigrid]] -deps = ["CommonSolve", "LinearAlgebra", "LinearSolve", "Printf", "Reexport", "SparseArrays"] -git-tree-sha1 = "eb3dbbca423d8e8a1d4061b890f775dcd31b8d7c" +deps = ["CommonSolve", "LinearAlgebra", "Printf", "Reexport", "SparseArrays"] +git-tree-sha1 = "796eedcb42226861a51d92d28ee82d4985ee860b" uuid = "2169fc97-5a83-5252-b627-83903c6c433c" -version = "0.6.0" +version = "0.5.1" [[deps.AliasTables]] deps = ["PtrArrays", "Random"] @@ -86,7 +91,7 @@ version = "0.5.6" [[deps.ArgTools]] uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f" -version = "1.1.1" +version = "1.1.2" [[deps.ArnoldiMethod]] deps = ["LinearAlgebra", "Random", "StaticArrays"] @@ -96,15 +101,16 @@ version = "0.4.0" [[deps.ArrayInterface]] deps = ["Adapt", "LinearAlgebra"] -git-tree-sha1 = "3640d077b6dafd64ceb8fd5c1ec76f7ca53bcf76" +git-tree-sha1 = "017fcb757f8e921fb44ee063a7aafe5f89b86dd1" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.16.0" +version = "7.18.0" [deps.ArrayInterface.extensions] ArrayInterfaceBandedMatricesExt = "BandedMatrices" ArrayInterfaceBlockBandedMatricesExt = "BlockBandedMatrices" ArrayInterfaceCUDAExt = "CUDA" ArrayInterfaceCUDSSExt = "CUDSS" + ArrayInterfaceChainRulesCoreExt = "ChainRulesCore" ArrayInterfaceChainRulesExt = "ChainRules" ArrayInterfaceGPUArraysCoreExt = "GPUArraysCore" ArrayInterfaceReverseDiffExt = "ReverseDiff" @@ -118,6 +124,7 @@ version = "7.16.0" CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba" CUDSS = "45b445bb-4962-46a0-9369-b4df9d0f772e" ChainRules = "082447d4-558c-5d27-93f4-14fc19e9eca2" + ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" GPUArraysCore = "46192b85-c4d5-4398-a991-12ede77f4527" ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" @@ -126,9 +133,9 @@ version = "7.16.0" [[deps.ArrayLayouts]] deps = ["FillArrays", "LinearAlgebra"] -git-tree-sha1 = "0dd7edaff278e346eb0ca07a7e75c9438408a3ce" +git-tree-sha1 = "4e25216b8fea1908a0ce0f5d87368587899f75be" uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a" -version = "1.10.3" +version = "1.11.1" weakdeps = ["SparseArrays"] [deps.ArrayLayouts.extensions] @@ -136,6 +143,7 @@ weakdeps = ["SparseArrays"] [[deps.Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" +version = "1.11.0" [[deps.AxisAlgorithms]] deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"] @@ -145,9 +153,9 @@ version = "1.1.0" [[deps.BandedMatrices]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "PrecompileTools"] -git-tree-sha1 = "dce2e49fc53490efb39161267d74f27be0ae2cee" +git-tree-sha1 = "614c6aba1d562191d9832df2af24f594aa7ebf61" uuid = "aae01518-5342-5314-be14-df237901396f" -version = "1.7.4" +version = "1.9.3" weakdeps = ["SparseArrays"] [deps.BandedMatrices.extensions] @@ -155,12 +163,13 @@ weakdeps = ["SparseArrays"] [[deps.Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" +version = "1.11.0" [[deps.BenchmarkTools]] -deps = ["JSON", "Logging", "Printf", "Profile", "Statistics", "UUIDs"] -git-tree-sha1 = "f1dff6729bc61f4d49e140da1af55dcd1ac97b2f" +deps = ["Compat", "JSON", "Logging", "Printf", "Profile", "Statistics", "UUIDs"] +git-tree-sha1 = "e38fbc49a620f5d0b660d7f543db1009fe0f8336" uuid = "6e4b80f9-dd63-53aa-95a3-0cdb28fa8baf" -version = "1.5.0" +version = "1.6.0" [[deps.Bijections]] git-tree-sha1 = "d8b0439d2be438a5f2cd68ec158fe08a7b2595b7" @@ -180,19 +189,30 @@ version = "0.1.6" [[deps.BlockArrays]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra"] -git-tree-sha1 = "5c0ffe1dff8cb7112de075f1b1cb32191675fcba" +git-tree-sha1 = "c633e7cea8a6eb9bed5d67e8fb184df5789b82e6" uuid = "8e7c35d0-a365-5155-bbbb-fb81a777f24e" -version = "1.1.0" -weakdeps = ["BandedMatrices"] +version = "1.5.0" +weakdeps = ["Adapt", "BandedMatrices"] [deps.BlockArrays.extensions] + BlockArraysAdaptExt = "Adapt" BlockArraysBandedMatricesExt = "BandedMatrices" +[[deps.BracketingNonlinearSolve]] +deps = ["CommonSolve", "ConcreteStructs", "NonlinearSolveBase", "PrecompileTools", "Reexport", "SciMLBase"] +git-tree-sha1 = "47d6e355097ef6df3c39080a0045ecfd00ff514e" +uuid = "70df07ce-3d50-431d-a3e7-ca6ddb60ac1e" +version = "1.1.1" +weakdeps = ["ForwardDiff"] + + [deps.BracketingNonlinearSolve.extensions] + BracketingNonlinearSolveForwardDiffExt = "ForwardDiff" + [[deps.Bzip2_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "9e2a6b69137e6969bab0152632dcb3bc108c8bdd" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "1b96ea4a01afe0ea4090c5c8039690672dd13f2e" uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" -version = "1.0.8+1" +version = "1.0.9+0" [[deps.CEnum]] git-tree-sha1 = "389ad5c84de1ae7cf0e28e381131c98ea87d54fc" @@ -213,15 +233,15 @@ version = "3.4.3" [[deps.Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "a2f1c8c668c8e3cb4cca4e57a8efdb09067bb3fd" +git-tree-sha1 = "2ac646d71d0d24b44f3f8c84da8c9f4d70fb67df" uuid = "83423d85-b0ee-5818-9007-b63ccbeb887a" -version = "1.18.0+2" +version = "1.18.4+0" [[deps.ChainRulesCore]] deps = ["Compat", "LinearAlgebra"] -git-tree-sha1 = "71acdbf594aab5bbb2cec89b208c41b4c411e49f" +git-tree-sha1 = "1713c74e00545bfe14605d2a2be1712de8fbcb58" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.24.0" +version = "1.25.1" weakdeps = ["SparseArrays"] [deps.ChainRulesCore.extensions] @@ -235,15 +255,15 @@ version = "0.1.13" [[deps.CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] -git-tree-sha1 = "bce6804e5e6044c6daab27bb533d1295e4a2e759" +git-tree-sha1 = "962834c22b66e32aa10f7611c08c8ca4e20749a9" uuid = "944b1d66-785c-5afd-91f1-9de20f533193" -version = "0.7.6" +version = "0.7.8" [[deps.ColorSchemes]] deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] -git-tree-sha1 = "b5278586822443594ff615963b0c09755771b3e0" +git-tree-sha1 = "403f2d8e209681fcbd9468a8514efff3ea08452e" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.26.0" +version = "3.29.0" [[deps.ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -273,10 +293,10 @@ uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" version = "1.0.2" [[deps.CommonMark]] -deps = ["Crayons", "JSON", "PrecompileTools", "URIs"] -git-tree-sha1 = "532c4185d3c9037c0237546d817858b23cf9e071" +deps = ["Crayons", "PrecompileTools"] +git-tree-sha1 = "3faae67b8899797592335832fccf4b3c80bb04fa" uuid = "a80b9123-70ca-4bc0-993e-6e3bcb318db6" -version = "0.8.12" +version = "0.8.15" [[deps.CommonSolve]] git-tree-sha1 = "0eee5eb66b1cf62cd6ad1b460238e60e4b09400c" @@ -296,9 +316,9 @@ version = "1.0.0" [[deps.CompactBasisFunctions]] deps = ["ContinuumArrays", "FastTransforms", "LinearAlgebra", "OffsetArrays", "QuadratureRules", "StaticArrays"] -git-tree-sha1 = "988eb64bb3cd0e4230f7ef0a5de95dace6e9f5f5" +git-tree-sha1 = "6f8940c3a0ca6534d88e1d931125117ce86fc67d" uuid = "a09551c4-f815-4143-809e-dd1986753ba7" -version = "0.2.12" +version = "0.2.14" [[deps.Compat]] deps = ["TOML", "UUIDs"] @@ -336,9 +356,9 @@ version = "0.2.3" [[deps.ConcurrentUtilities]] deps = ["Serialization", "Sockets"] -git-tree-sha1 = "ea32b83ca4fefa1768dc84e504cc0a94fb1ab8d1" +git-tree-sha1 = "d9d26935a0bcffc87d2613ce14c527c99fc543fd" uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" -version = "2.4.2" +version = "2.5.0" [[deps.Conda]] deps = ["Downloads", "JSON", "VersionParsing"] @@ -347,21 +367,21 @@ uuid = "8f4d0f93-b110-5947-807f-2305c1781a2d" version = "1.10.2" [[deps.ConstructionBase]] -deps = ["LinearAlgebra"] -git-tree-sha1 = "d8a9c0b6ac2d9081bf76324b39c78ca3ce4f0c98" +git-tree-sha1 = "76219f1ed5771adbb096743bff43fb5fdd4c1157" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.6" -weakdeps = ["IntervalSets", "StaticArrays"] +version = "1.5.8" +weakdeps = ["IntervalSets", "LinearAlgebra", "StaticArrays"] [deps.ConstructionBase.extensions] ConstructionBaseIntervalSetsExt = "IntervalSets" + ConstructionBaseLinearAlgebraExt = "LinearAlgebra" ConstructionBaseStaticArraysExt = "StaticArrays" [[deps.ContinuumArrays]] deps = ["AbstractFFTs", "ArrayLayouts", "BandedMatrices", "BlockArrays", "DomainSets", "FillArrays", "InfiniteArrays", "Infinities", "IntervalSets", "LazyArrays", "LinearAlgebra", "QuasiArrays", "StaticArrays"] -git-tree-sha1 = "d9a579a7111b5e4102747a67392f4e794f616f28" +git-tree-sha1 = "0109775d5d139205edc25d0e667422bc60f7097a" uuid = "7ae1f121-cc2c-504b-ac30-9b923412ae5c" -version = "0.18.4" +version = "0.19.2" [deps.ContinuumArrays.extensions] ContinuumArraysMakieExt = "Makie" @@ -389,9 +409,9 @@ version = "4.1.1" [[deps.DSP]] deps = ["Compat", "FFTW", "IterTools", "LinearAlgebra", "Polynomials", "Random", "Reexport", "SpecialFunctions", "Statistics"] -git-tree-sha1 = "f7f4319567fe769debfcf7f8c03d8da1dd4e2fb0" +git-tree-sha1 = "0df00546373af8eee1598fb4b2ba480b1ebe895c" uuid = "717857b8-e6f2-59f4-9121-6e50c889abd2" -version = "0.7.9" +version = "0.7.10" [[deps.DataAPI]] git-tree-sha1 = "abe83f3a2f1b857aac70ef8b269080af17764bbe" @@ -400,9 +420,9 @@ version = "1.16.0" [[deps.DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] -git-tree-sha1 = "1d0a14036acb104d9e89698bd408f63ab58cdc82" +git-tree-sha1 = "4e1fe97fdaed23e9dc21d4d664bea76b65fc50a0" uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8" -version = "0.18.20" +version = "0.18.22" [[deps.DataValueInterfaces]] git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" @@ -412,6 +432,7 @@ version = "1.0.0" [[deps.Dates]] deps = ["Printf"] uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" +version = "1.11.0" [[deps.Dbus_jll]] deps = ["Artifacts", "Expat_jll", "JLLWrappers", "Libdl"] @@ -421,9 +442,9 @@ version = "1.14.10+0" [[deps.DecFP]] deps = ["DecFP_jll", "Printf", "Random", "SpecialFunctions"] -git-tree-sha1 = "4a10cec664e26d9d63597daf9e62147e79d636e3" +git-tree-sha1 = "88e521a871a1b11488a1f48b8c085b4be8f71be5" uuid = "55939f99-70c6-5e9b-8bb0-5071ed7d61fd" -version = "1.3.2" +version = "1.4.1" [[deps.DecFP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -438,16 +459,18 @@ uuid = "8bb1440f-4735-579b-a4ab-409b98df4dab" version = "1.9.1" [[deps.DiffEqBase]] -deps = ["ArrayInterface", "ConcreteStructs", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "FastClosures", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "Setfield", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] -git-tree-sha1 = "d7d43a1cc11dc4e4e5378816ae720fccd75a77c8" +deps = ["ArrayInterface", "ConcreteStructs", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "FastClosures", "FastPower", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "Setfield", "Static", "StaticArraysCore", "Statistics", "TruncatedStacktraces"] +git-tree-sha1 = "b68847ddc7b8f3c77a84521b0fd50375274a380b" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.155.0" +version = "6.165.1" [deps.DiffEqBase.extensions] DiffEqBaseCUDAExt = "CUDA" DiffEqBaseChainRulesCoreExt = "ChainRulesCore" DiffEqBaseDistributionsExt = "Distributions" DiffEqBaseEnzymeExt = ["ChainRulesCore", "Enzyme"] + DiffEqBaseForwardDiffExt = ["ForwardDiff"] + DiffEqBaseGTPSAExt = "GTPSA" DiffEqBaseGeneralizedGeneratedExt = "GeneralizedGenerated" DiffEqBaseMPIExt = "MPI" DiffEqBaseMeasurementsExt = "Measurements" @@ -462,6 +485,8 @@ version = "6.155.0" ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f" Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9" + ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210" + GTPSA = "b27dd330-f138-47c5-815b-40db9dd9b6e8" GeneralizedGenerated = "6b9d7cbe-bcb9-11e9-073f-15a7a543e2eb" MPI = "da04e1cc-30fd-572f-bb4f-1f8673147195" Measurements = "eff96d63-e80a-5855-80a2-b1b0885c5ab7" @@ -472,23 +497,22 @@ version = "6.155.0" Unitful = "1986cc42-f94f-5a68-af5c-568840ba703d" [[deps.DiffEqCallbacks]] -deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "Functors", "LinearAlgebra", "Markdown", "NonlinearSolve", "Parameters", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArraysCore"] -git-tree-sha1 = "19dbd44d18bbfdfcf5e56c99cea9b0ed23df350a" +deps = ["ConcreteStructs", "DataStructures", "DiffEqBase", "DifferentiationInterface", "Functors", "LinearAlgebra", "Markdown", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArraysCore"] +git-tree-sha1 = "c4966e57a993a181b6d613cf0d267c46fe49139d" uuid = "459566f4-90b8-5000-8ac3-15dfb0a30def" -version = "3.9.1" -weakdeps = ["OrdinaryDiffEq", "OrdinaryDiffEqCore", "Sundials"] +version = "4.3.0" [[deps.DiffEqDevTools]] deps = ["DiffEqBase", "DiffEqNoiseProcess", "Distributed", "LinearAlgebra", "Logging", "NLsolve", "RecipesBase", "RecursiveArrayTools", "RootedTrees", "SciMLBase", "Statistics", "StructArrays"] -git-tree-sha1 = "35f51dc83977ca2cc45f9a0abd55ed9efd54eff7" +git-tree-sha1 = "47bec1e757e2325b1d16bf7d15e9b26165892c53" uuid = "f3b72e0c-5b89-59e1-b016-84e28bfd966d" -version = "2.45.0" +version = "2.47.0" [[deps.DiffEqNoiseProcess]] deps = ["DiffEqBase", "Distributions", "GPUArraysCore", "LinearAlgebra", "Markdown", "Optim", "PoissonRandom", "QuadGK", "Random", "Random123", "RandomNumbers", "RecipesBase", "RecursiveArrayTools", "ResettableStacks", "SciMLBase", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "ab1e6515ce15f01316a9825b02729fefa51726bd" +git-tree-sha1 = "516d553f5deee7c55b2945b5edf05b6542837887" uuid = "77a26b50-5914-5dd7-bc55-306e6241c503" -version = "5.23.0" +version = "5.24.1" [deps.DiffEqNoiseProcess.extensions] DiffEqNoiseProcessReverseDiffExt = "ReverseDiff" @@ -509,46 +533,69 @@ uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" version = "1.15.1" [[deps.DifferentiationInterface]] -deps = ["ADTypes", "Compat", "DocStringExtensions", "FillArrays", "LinearAlgebra", "PackageExtensionCompat", "SparseArrays", "SparseMatrixColorings"] -git-tree-sha1 = "9b23f9a816790b8ab9914c3c86321a546e92cbe7" +deps = ["ADTypes", "LinearAlgebra"] +git-tree-sha1 = "cf6dcb4b21bdd893fd45be70791d6dc89ca16506" uuid = "a0c0ee7d-e4b9-4e03-894e-1c5f64a51d63" -version = "0.5.17" +version = "0.6.48" [deps.DifferentiationInterface.extensions] DifferentiationInterfaceChainRulesCoreExt = "ChainRulesCore" DifferentiationInterfaceDiffractorExt = "Diffractor" - DifferentiationInterfaceEnzymeExt = "Enzyme" + DifferentiationInterfaceEnzymeExt = ["EnzymeCore", "Enzyme"] DifferentiationInterfaceFastDifferentiationExt = "FastDifferentiation" DifferentiationInterfaceFiniteDiffExt = "FiniteDiff" DifferentiationInterfaceFiniteDifferencesExt = "FiniteDifferences" - DifferentiationInterfaceForwardDiffExt = "ForwardDiff" - DifferentiationInterfacePolyesterForwardDiffExt = "PolyesterForwardDiff" - DifferentiationInterfaceReverseDiffExt = "ReverseDiff" + DifferentiationInterfaceForwardDiffExt = ["ForwardDiff", "DiffResults"] + DifferentiationInterfaceGTPSAExt = "GTPSA" + DifferentiationInterfaceMooncakeExt = "Mooncake" + DifferentiationInterfacePolyesterForwardDiffExt = ["PolyesterForwardDiff", "ForwardDiff", "DiffResults"] + DifferentiationInterfaceReverseDiffExt = ["ReverseDiff", "DiffResults"] + DifferentiationInterfaceSparseArraysExt = "SparseArrays" + DifferentiationInterfaceSparseConnectivityTracerExt = "SparseConnectivityTracer" + DifferentiationInterfaceSparseMatrixColoringsExt = "SparseMatrixColorings" + DifferentiationInterfaceStaticArraysExt = "StaticArrays" DifferentiationInterfaceSymbolicsExt = "Symbolics" - DifferentiationInterfaceTapirExt = "Tapir" DifferentiationInterfaceTrackerExt = "Tracker" DifferentiationInterfaceZygoteExt = ["Zygote", "ForwardDiff"] [deps.DifferentiationInterface.weakdeps] ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" + DiffResults = "163ba53b-c6d8-5494-b064-1a9d43ac40c5" Diffractor = "9f5e2b26-1114-432f-b630-d3fe2085c51c" Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9" + EnzymeCore = "f151be2c-9106-41f4-ab19-57ee4f262869" FastDifferentiation = "eb9bf01b-bf85-4b60-bf87-ee5de06c00be" FiniteDiff = "6a86dc24-6348-571c-b903-95158fe2bd41" FiniteDifferences = "26cc04aa-876d-5657-8c51-4c34ba976000" ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210" + GTPSA = "b27dd330-f138-47c5-815b-40db9dd9b6e8" + Mooncake = "da2b9cff-9c12-43a0-ae48-6db2b0edb7d6" PolyesterForwardDiff = "98d1487c-24ca-40b6-b7ab-df2af84e126b" ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" + SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" + SparseConnectivityTracer = "9f842d2f-2579-4b1d-911e-f412cf18a3f5" + SparseMatrixColorings = "0a514795-09f3-496d-8182-132a7b665d35" + StaticArrays = "90137ffa-7385-5640-81b9-e52037218182" Symbolics = "0c5d862f-8b57-4792-8d23-62f2024744c7" - Tapir = "07d77754-e150-4737-8c94-cd238a1fb45b" Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" +[[deps.DispatchDoctor]] +deps = ["MacroTools", "Preferences"] +git-tree-sha1 = "f311fe66bfe4e38b2f1c8d1081f06920092b57aa" +uuid = "8d63f2c5-f18a-4cf2-ba9d-b3f60fc568c8" +version = "0.4.19" +weakdeps = ["ChainRulesCore", "EnzymeCore"] + + [deps.DispatchDoctor.extensions] + DispatchDoctorChainRulesCoreExt = "ChainRulesCore" + DispatchDoctorEnzymeCoreExt = "EnzymeCore" + [[deps.Distances]] deps = ["LinearAlgebra", "Statistics", "StatsAPI"] -git-tree-sha1 = "66c4c81f259586e8f002eacebc177e1fb06363b0" +git-tree-sha1 = "c7e3a542b999843086e2f29dac96a618c105be1d" uuid = "b4f34e82-e78d-54a5-968a-f98e89d6e8f7" -version = "0.10.11" +version = "0.10.12" weakdeps = ["ChainRulesCore", "SparseArrays"] [deps.Distances.extensions] @@ -558,12 +605,13 @@ weakdeps = ["ChainRulesCore", "SparseArrays"] [[deps.Distributed]] deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" +version = "1.11.0" [[deps.Distributions]] deps = ["AliasTables", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns"] -git-tree-sha1 = "e6c693a0e4394f8fda0e51a5bdf5aef26f8235e9" +git-tree-sha1 = "0b4190661e8a4e51a842070e7dd4fae440ddb7f4" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.111" +version = "0.25.118" [deps.Distributions.extensions] DistributionsChainRulesCoreExt = "ChainRulesCore" @@ -589,9 +637,9 @@ version = "0.27.25" [[deps.DomainSets]] deps = ["CompositeTypes", "IntervalSets", "LinearAlgebra", "Random", "StaticArrays"] -git-tree-sha1 = "490392af2c7d63183bfa2c8aaa6ab981c5ba7561" +git-tree-sha1 = "a7e9f13f33652c533d49868a534bfb2050d1365f" uuid = "5b8099bc-c8ec-5219-889f-1d9e522a28bf" -version = "0.7.14" +version = "0.7.15" [deps.DomainSets.extensions] DomainSetsMakieExt = "Makie" @@ -605,16 +653,16 @@ uuid = "f43a241f-c20a-4ad4-852c-f6b1247861c6" version = "1.6.0" [[deps.DynamicPolynomials]] -deps = ["Future", "LinearAlgebra", "MultivariatePolynomials", "MutableArithmetics", "Pkg", "Reexport", "Test"] -git-tree-sha1 = "30a1848c4f4fc35d1d4bbbd125650f6a11b5bc6c" +deps = ["Future", "LinearAlgebra", "MultivariatePolynomials", "MutableArithmetics", "Reexport", "Test"] +git-tree-sha1 = "9a3ae38b460449cc9e7dd0cfb059c76028724627" uuid = "7c1d4256-1411-5781-91ec-d7bc3513ac07" -version = "0.5.7" +version = "0.6.1" [[deps.DynamicQuantities]] -deps = ["Compat", "PackageExtensionCompat", "Tricks"] -git-tree-sha1 = "412b25c7d99ec6b06967d315c7b29bb8e484f092" +deps = ["DispatchDoctor", "PrecompileTools", "TestItems", "Tricks"] +git-tree-sha1 = "2cf4f27ea6997aabf4b3e3b97355af3d757efd6b" uuid = "06fc5a27-2a28-4c7c-a15d-362465fb6821" -version = "0.13.2" +version = "1.7.0" [deps.DynamicQuantities.extensions] DynamicQuantitiesLinearAlgebraExt = "LinearAlgebra" @@ -634,9 +682,9 @@ uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56" version = "1.0.4" [[deps.EnzymeCore]] -git-tree-sha1 = "8f205a601760f4798a10f138c3940f0451d95188" +git-tree-sha1 = "0cdb7af5c39e92d78a0ee8d0a447d32f7593137e" uuid = "f151be2c-9106-41f4-ab19-57ee4f262869" -version = "0.7.8" +version = "0.8.8" weakdeps = ["Adapt"] [deps.EnzymeCore.extensions] @@ -644,44 +692,47 @@ weakdeps = ["Adapt"] [[deps.EpollShim_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "8e9441ee83492030ace98f9789a654a6d0b1f643" +git-tree-sha1 = "8a4be429317c42cfae6a7fc03c31bad1970c310d" uuid = "2702e6a9-849d-5ed8-8c21-79e8b8f9ee43" -version = "0.0.20230411+0" +version = "0.0.20230411+1" [[deps.ExceptionUnwrapping]] deps = ["Test"] -git-tree-sha1 = "dcb08a0d93ec0b1cdc4af184b26b591e9695423a" +git-tree-sha1 = "d36f682e590a83d63d1c7dbd287573764682d12a" uuid = "460bff9d-24e4-43bc-9d9f-a8973cb893f4" -version = "0.1.10" +version = "0.1.11" [[deps.Expat_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "1c6317308b9dc757616f0b5cb379db10494443a7" +git-tree-sha1 = "d55dffd9ae73ff72f1c0482454dcf2ec6c6c4a63" uuid = "2e619515-83b5-522b-bb60-26c02a35a201" -version = "2.6.2+0" +version = "2.6.5+0" [[deps.ExponentialUtilities]] deps = ["Adapt", "ArrayInterface", "GPUArraysCore", "GenericSchur", "LinearAlgebra", "PrecompileTools", "Printf", "SparseArrays", "libblastrampoline_jll"] -git-tree-sha1 = "8e18940a5ba7f4ddb41fe2b79b6acaac50880a86" +git-tree-sha1 = "cae251c76f353e32d32d76fae2fea655eab652af" uuid = "d4d017d3-3776-5f7e-afef-a10c40355c18" -version = "1.26.1" +version = "1.27.0" +weakdeps = ["StaticArrays"] + + [deps.ExponentialUtilities.extensions] + ExponentialUtilitiesStaticArraysExt = "StaticArrays" [[deps.ExprTools]] git-tree-sha1 = "27415f162e6028e81c72b82ef756bf321213b6ec" uuid = "e2ba6199-217a-4e67-a87a-7c52f15ade04" version = "0.1.10" -[[deps.Expronicon]] -deps = ["MLStyle", "Pkg", "TOML"] -git-tree-sha1 = "fc3951d4d398b5515f91d7fe5d45fc31dccb3c9b" -uuid = "6b7a57c9-7cc1-4fdf-b7f5-e857abae3636" -version = "0.8.5" +[[deps.ExproniconLite]] +git-tree-sha1 = "c13f0b150373771b0fdc1713c97860f8df12e6c2" +uuid = "55351af7-c7e9-48d6-89ff-24e801d99491" +version = "0.10.14" [[deps.FFMPEG]] deps = ["FFMPEG_jll"] -git-tree-sha1 = "b57e3acbe22f8484b4b5ff66a7499717fe1a9cc8" +git-tree-sha1 = "53ebe7511fa11d33bec688a9178fac4e49eeee00" uuid = "c87230d0-a227-11e9-1b43-d7ebe4e7570a" -version = "0.4.1" +version = "0.4.2" [[deps.FFMPEG_jll]] deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "LAME_jll", "Libdl", "Ogg_jll", "OpenSSL_jll", "Opus_jll", "PCRE2_jll", "Zlib_jll", "libaom_jll", "libass_jll", "libfdk_aac_jll", "libvorbis_jll", "x264_jll", "x265_jll"] @@ -691,15 +742,15 @@ version = "4.4.4+1" [[deps.FFTW]] deps = ["AbstractFFTs", "FFTW_jll", "LinearAlgebra", "MKL_jll", "Preferences", "Reexport"] -git-tree-sha1 = "4820348781ae578893311153d69049a93d05f39d" +git-tree-sha1 = "7de7c78d681078f027389e067864a8d53bd7c3c9" uuid = "7a1cc6ca-52ef-59f5-83cd-3a7055c09341" -version = "1.8.0" +version = "1.8.1" [[deps.FFTW_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "c6033cc3892d0ef5bb9cd29b7f2f0331ea5184ea" +git-tree-sha1 = "4d81ed14783ec49ce9f2e168208a12ce1815aa25" uuid = "f5851436-0d7a-5f13-b9de-f02708fd171a" -version = "3.3.10+0" +version = "3.3.10+3" [[deps.FastBroadcast]] deps = ["ArrayInterface", "LinearAlgebra", "Polyester", "Static", "StaticArrayInterface", "StrideArraysCore"] @@ -718,17 +769,32 @@ git-tree-sha1 = "fd923962364b645f3719855c88f7074413a6ad92" uuid = "442a2c76-b920-505d-bb47-c5924d526838" version = "1.0.2" -[[deps.FastLapackInterface]] -deps = ["LinearAlgebra"] -git-tree-sha1 = "cbf5edddb61a43669710cbc2241bc08b36d9e660" -uuid = "29a986be-02c6-4525-aec4-84b980013641" -version = "2.0.4" +[[deps.FastPower]] +git-tree-sha1 = "58c3431137131577a7c379d00fea00be524338fb" +uuid = "a4df4552-cc26-4903-aec0-212e50a0e84b" +version = "1.1.1" + + [deps.FastPower.extensions] + FastPowerEnzymeExt = "Enzyme" + FastPowerForwardDiffExt = "ForwardDiff" + FastPowerMeasurementsExt = "Measurements" + FastPowerMonteCarloMeasurementsExt = "MonteCarloMeasurements" + FastPowerReverseDiffExt = "ReverseDiff" + FastPowerTrackerExt = "Tracker" + + [deps.FastPower.weakdeps] + Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9" + ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210" + Measurements = "eff96d63-e80a-5855-80a2-b1b0885c5ab7" + MonteCarloMeasurements = "0987c9cc-fe09-11e8-30f0-b96dd679fdca" + ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" + Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" [[deps.FastTransforms]] -deps = ["AbstractFFTs", "BandedMatrices", "FFTW", "FastGaussQuadrature", "FastTransforms_jll", "FillArrays", "GenericFFT", "Libdl", "LinearAlgebra", "Reexport", "SpecialFunctions", "ToeplitzMatrices"] -git-tree-sha1 = "8ef4a98b14c07bf5ebb8c848e6634555523d49a6" +deps = ["AbstractFFTs", "ArrayLayouts", "BandedMatrices", "FFTW", "FastGaussQuadrature", "FastTransforms_jll", "FillArrays", "GenericFFT", "LazyArrays", "Libdl", "LinearAlgebra", "RecurrenceRelationships", "SpecialFunctions", "ToeplitzMatrices"] +git-tree-sha1 = "b41969ccec1379b33967c9b720a250d4687cfc2d" uuid = "057dd010-8810-581a-b7be-e3fc3b93f78c" -version = "0.16.4" +version = "0.17.0" [[deps.FastTransforms_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "FFTW_jll", "JLLWrappers", "LLVMOpenMP_jll", "Libdl", "MPFR_jll", "OpenBLAS_jll"] @@ -738,12 +804,17 @@ version = "0.6.3+0" [[deps.FileIO]] deps = ["Pkg", "Requires", "UUIDs"] -git-tree-sha1 = "82d8afa92ecf4b52d78d869f038ebfb881267322" +git-tree-sha1 = "b66970a70db13f45b7e57fbda1736e1cf72174ea" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" -version = "1.16.3" +version = "1.17.0" +weakdeps = ["HTTP"] + + [deps.FileIO.extensions] + HTTPExt = "HTTP" [[deps.FileWatching]] uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee" +version = "1.11.0" [[deps.FillArrays]] deps = ["LinearAlgebra"] @@ -763,19 +834,21 @@ uuid = "64ca27bc-2ba2-4a57-88aa-44e436879224" version = "1.4.1" [[deps.FiniteDiff]] -deps = ["ArrayInterface", "LinearAlgebra", "Setfield", "SparseArrays"] -git-tree-sha1 = "f9219347ebf700e77ca1d48ef84e4a82a6701882" +deps = ["ArrayInterface", "LinearAlgebra", "Setfield"] +git-tree-sha1 = "f089ab1f834470c525562030c8cfde4025d5e915" uuid = "6a86dc24-6348-571c-b903-95158fe2bd41" -version = "2.24.0" +version = "2.27.0" [deps.FiniteDiff.extensions] FiniteDiffBandedMatricesExt = "BandedMatrices" FiniteDiffBlockBandedMatricesExt = "BlockBandedMatrices" + FiniteDiffSparseArraysExt = "SparseArrays" FiniteDiffStaticArraysExt = "StaticArrays" [deps.FiniteDiff.weakdeps] BandedMatrices = "aae01518-5342-5314-be14-df237901396f" BlockBandedMatrices = "ffab5731-97b5-5995-9138-79e8c1846df0" + SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" StaticArrays = "90137ffa-7385-5640-81b9-e52037218182" [[deps.FixedPointNumbers]] @@ -786,15 +859,15 @@ version = "0.8.5" [[deps.FlameGraphs]] deps = ["AbstractTrees", "Colors", "FileIO", "FixedPointNumbers", "IndirectArrays", "LeftChildRightSiblingTrees", "Profile"] -git-tree-sha1 = "bd1aaf448be998ea427b1c7213b8acf2e278498b" +git-tree-sha1 = "0166baf81babb91cf78bfcc771d8e87c43d568df" uuid = "08572546-2f56-4bcf-ba4e-bab62c3a3f89" -version = "1.0.0" +version = "1.1.0" [[deps.Fontconfig_jll]] deps = ["Artifacts", "Bzip2_jll", "Expat_jll", "FreeType2_jll", "JLLWrappers", "Libdl", "Libuuid_jll", "Zlib_jll"] -git-tree-sha1 = "db16beca600632c95fc8aca29890d83788dd8b23" +git-tree-sha1 = "21fac3c77d7b5a9fc03b0ec503aa1a6392c34d2b" uuid = "a3f928ae-7b40-5064-980b-68af3947d34b" -version = "2.13.96+0" +version = "2.15.0+0" [[deps.Format]] git-tree-sha1 = "9c68794ef81b08086aeb32eeaf33531668d5f5fc" @@ -803,9 +876,9 @@ version = "1.3.7" [[deps.ForwardDiff]] deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions"] -git-tree-sha1 = "cf0fe81336da9fb90944683b8c41984b08793dad" +git-tree-sha1 = "a2df1b776752e3f344e5116c06d75a10436ab853" uuid = "f6369f11-7733-5829-9624-2563aa707210" -version = "0.10.36" +version = "0.10.38" weakdeps = ["StaticArrays"] [deps.ForwardDiff.extensions] @@ -813,15 +886,15 @@ weakdeps = ["StaticArrays"] [[deps.FreeType2_jll]] deps = ["Artifacts", "Bzip2_jll", "JLLWrappers", "Libdl", "Zlib_jll"] -git-tree-sha1 = "5c1d8ae0efc6c2e7b1fc502cbe25def8f661b7bc" +git-tree-sha1 = "786e968a8d2fb167f2e4880baba62e0e26bd8e4e" uuid = "d7e528f0-a631-5988-bf34-fe36492bcfd7" -version = "2.13.2+0" +version = "2.13.3+1" [[deps.FriBidi_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "1ed150b39aebcc805c26b93a8d0122c940f64ce2" +git-tree-sha1 = "846f7026a9decf3679419122b49f8a1fdb48d2d5" uuid = "559328eb-81f9-559d-9380-de523a88c83c" -version = "1.0.14+0" +version = "1.0.16+0" [[deps.FunctionWrappers]] git-tree-sha1 = "d62485945ce5ae9c0c48f124a84998d755bae00e" @@ -835,43 +908,44 @@ uuid = "77dc65aa-8811-40c2-897b-53d922fa7daf" version = "0.1.3" [[deps.Functors]] -deps = ["LinearAlgebra"] -git-tree-sha1 = "64d8e93700c7a3f28f717d265382d52fac9fa1c1" +deps = ["Compat", "ConstructionBase", "LinearAlgebra", "Random"] +git-tree-sha1 = "60a0339f28a233601cb74468032b5c302d5067de" uuid = "d9f16b24-f501-4c13-a1f2-28368ffc5196" -version = "0.4.12" +version = "0.5.2" [[deps.Future]] deps = ["Random"] uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820" +version = "1.11.0" [[deps.GLFW_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libglvnd_jll", "Xorg_libXcursor_jll", "Xorg_libXi_jll", "Xorg_libXinerama_jll", "Xorg_libXrandr_jll", "libdecor_jll", "xkbcommon_jll"] -git-tree-sha1 = "532f9126ad901533af1d4f5c198867227a7bb077" +git-tree-sha1 = "fcb0584ff34e25155876418979d4c8971243bb89" uuid = "0656b61e-2033-5cc2-a64a-77c0f6c09b89" -version = "3.4.0+1" +version = "3.4.0+2" [[deps.GMP_jll]] deps = ["Artifacts", "Libdl"] uuid = "781609d7-10c4-51f6-84f2-b8444358ff6d" -version = "6.2.1+6" +version = "6.3.0+0" [[deps.GPUArraysCore]] deps = ["Adapt"] -git-tree-sha1 = "ec632f177c0d990e64d955ccc1b8c04c485a0950" +git-tree-sha1 = "83cf05ab16a73219e5f6bd1bdfa9848fa24ac627" uuid = "46192b85-c4d5-4398-a991-12ede77f4527" -version = "0.1.6" +version = "0.2.0" [[deps.GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Preferences", "Printf", "Qt6Wayland_jll", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "p7zip_jll"] -git-tree-sha1 = "629693584cef594c3f6f99e76e7a7ad17e60e8d5" +git-tree-sha1 = "0ff136326605f8e06e9bcf085a356ab312eef18a" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.73.7" +version = "0.73.13" [[deps.GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "FreeType2_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt6Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "a8863b69c2a0859f2c2c87ebdc4c6712e88bdf0d" +git-tree-sha1 = "9cb62849057df859575fc1dda1e91b82f8609709" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.73.7+0" +version = "0.73.13+0" [[deps.GenericFFT]] deps = ["AbstractFFTs", "FFTW", "LinearAlgebra", "Reexport"] @@ -881,9 +955,9 @@ version = "0.1.6" [[deps.GenericLinearAlgebra]] deps = ["LinearAlgebra", "Printf", "Random", "libblastrampoline_jll"] -git-tree-sha1 = "39783f639367ea6d6673540134e62f6c1bc2b4d2" +git-tree-sha1 = "54ee4866eb8c982ee23cf79230ca0aaf916c382b" uuid = "14197337-ba66-59df-a3e3-ca00e7dcff7a" -version = "0.3.12" +version = "0.3.15" [[deps.GenericSchur]] deps = ["LinearAlgebra", "Printf"] @@ -929,15 +1003,15 @@ version = "1.3.1" [[deps.Git_jll]] deps = ["Artifacts", "Expat_jll", "JLLWrappers", "LibCURL_jll", "Libdl", "Libiconv_jll", "OpenSSL_jll", "PCRE2_jll", "Zlib_jll"] -git-tree-sha1 = "d18fb8a1f3609361ebda9bf029b60fd0f120c809" +git-tree-sha1 = "399f4a308c804b446ae4c91eeafadb2fe2c54ff9" uuid = "f8c6e375-362e-5223-8a59-34ff63f689eb" -version = "2.44.0+2" +version = "2.47.1+0" [[deps.Glib_jll]] deps = ["Artifacts", "Gettext_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Libiconv_jll", "Libmount_jll", "PCRE2_jll", "Zlib_jll"] -git-tree-sha1 = "7c82e6a6cd34e9d935e9aa4051b66c6ff3af59ba" +git-tree-sha1 = "b0036b392358c80d2d2124746c2bf3d48d457938" uuid = "7746bdde-850d-59dc-9ae8-88ece973131d" -version = "2.80.2+0" +version = "2.82.4+0" [[deps.Glob]] git-tree-sha1 = "97285bbd5230dd766e9ef6749b80fc617126d496" @@ -946,15 +1020,15 @@ version = "1.3.1" [[deps.Graphite2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "344bf40dcab1073aca04aa0df4fb092f920e4011" +git-tree-sha1 = "01979f9b37367603e2848ea225918a3b3861b606" uuid = "3b182d85-2403-5c21-9c21-1e1f0cc25472" -version = "1.3.14+0" +version = "1.3.14+1" [[deps.Graphs]] deps = ["ArnoldiMethod", "Compat", "DataStructures", "Distributed", "Inflate", "LinearAlgebra", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics"] -git-tree-sha1 = "ebd18c326fa6cee1efb7da9a3b45cf69da2ed4d9" +git-tree-sha1 = "1dc470db8b1131cfc7fb4c115de89fe391b9e780" uuid = "86223c79-3864-5bf0-83f7-82e725a168b6" -version = "1.11.2" +version = "1.12.0" [[deps.Grisu]] git-tree-sha1 = "53bb909d1151e57e2484c3d1b53e19552b887fb2" @@ -968,22 +1042,22 @@ uuid = "f67ccb44-e63f-5c2f-98bd-6dc0ccc4ba2f" version = "0.16.16" [[deps.HDF5_jll]] -deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LLVMOpenMP_jll", "LazyArtifacts", "LibCURL_jll", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "OpenSSL_jll", "TOML", "Zlib_jll", "libaec_jll"] -git-tree-sha1 = "38c8874692d48d5440d5752d6c74b0c6b0b60739" +deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "LibCURL_jll", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "OpenSSL_jll", "TOML", "Zlib_jll", "libaec_jll"] +git-tree-sha1 = "e94f84da9af7ce9c6be049e9067e511e17ff89ec" uuid = "0234f1f7-429e-5d53-9886-15a909be8d59" -version = "1.14.2+1" +version = "1.14.6+0" [[deps.HTTP]] -deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "ExceptionUnwrapping", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] -git-tree-sha1 = "d1d712be3164d61d1fb98e7ce9bcbc6cc06b45ed" +deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "ExceptionUnwrapping", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "PrecompileTools", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] +git-tree-sha1 = "c67b33b085f6e2faf8bf79a61962e7339a81129c" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "1.10.8" +version = "1.10.15" [[deps.HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll"] -git-tree-sha1 = "401e4f3f30f43af2c8478fc008da50096ea5240f" +git-tree-sha1 = "55c53be97790242c29031e5cd45e8ac296dadda3" uuid = "2e76f6c2-a576-52d4-95c1-20adfe4de566" -version = "8.3.1+0" +version = "8.5.0+0" [[deps.Highlights]] deps = ["DocStringExtensions", "InteractiveUtils", "REPL"] @@ -999,21 +1073,21 @@ version = "0.1.17" [[deps.Hwloc_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "5e19e1e4fa3e71b774ce746274364aef0234634e" +git-tree-sha1 = "f93a9ce66cd89c9ba7a4695a47fd93b4c6bc59fa" uuid = "e33a78d0-f292-5ffc-b300-72abe9b543c8" -version = "2.11.1+0" +version = "2.12.0+0" [[deps.HypergeometricFunctions]] deps = ["LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] -git-tree-sha1 = "7c4195be1649ae622304031ed46a2f4df989f1eb" +git-tree-sha1 = "68c173f4f449de5b438ee67ed0c9c748dc31a2ec" uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.24" +version = "0.3.28" [[deps.IJulia]] deps = ["Base64", "Conda", "Dates", "InteractiveUtils", "JSON", "Libdl", "Logging", "Markdown", "MbedTLS", "Pkg", "Printf", "REPL", "Random", "SoftGlobalScope", "Test", "UUIDs", "ZMQ"] -git-tree-sha1 = "1702f79fa30f56b68d5b2fd6fb3a9a14ff6f9130" +git-tree-sha1 = "1b1299f7d6617291f3d260e9f5b0250afdaac8c0" uuid = "7073ff75-c697-5162-941a-fcdaad2a7d2a" -version = "1.25.0" +version = "1.26.0" [[deps.IOCapture]] deps = ["Logging", "Random"] @@ -1039,34 +1113,49 @@ version = "1.0.0" [[deps.InfiniteArrays]] deps = ["ArrayLayouts", "FillArrays", "Infinities", "LazyArrays", "LinearAlgebra"] -git-tree-sha1 = "478ad747fd8e0ac2506a19770e9597289e6027ad" +git-tree-sha1 = "c691bb4e60abe42f76fba8083dd50122e97bbd7b" uuid = "4858937d-0d70-526a-a4dd-2d5cb5dd786c" -version = "0.14.3" -weakdeps = ["DSP", "Statistics"] +version = "0.15.6" [deps.InfiniteArrays.extensions] + InfiniteArraysBandedMatricesExt = "BandedMatrices" + InfiniteArraysBlockArraysExt = "BlockArrays" + InfiniteArraysBlockBandedMatricesExt = "BlockBandedMatrices" InfiniteArraysDSPExt = "DSP" InfiniteArraysStatisticsExt = "Statistics" + [deps.InfiniteArrays.weakdeps] + BandedMatrices = "aae01518-5342-5314-be14-df237901396f" + BlockArrays = "8e7c35d0-a365-5155-bbbb-fb81a777f24e" + BlockBandedMatrices = "ffab5731-97b5-5995-9138-79e8c1846df0" + DSP = "717857b8-e6f2-59f4-9121-6e50c889abd2" + Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" + [[deps.Infinities]] -git-tree-sha1 = "6336676b91409ec0a2c82723de9bdf4cabd02d78" +git-tree-sha1 = "437cd9b81b649574582507d8b9ca3ffc981f2fc2" uuid = "e1ba4f0e-776d-440f-acd9-e1d2e9742647" -version = "0.1.8" +version = "0.1.11" [[deps.Inflate]] git-tree-sha1 = "d1b1b796e47d94588b3757fe84fbf65a5ec4a80d" uuid = "d25df0c9-e2be-5dd7-82c8-3ad0b3e990b9" version = "0.1.5" +[[deps.IntegerMathUtils]] +git-tree-sha1 = "b8ffb903da9f7b8cf695a8bead8e01814aa24b30" +uuid = "18e54dd8-cb9d-406c-a71d-865a43cbb235" +version = "0.1.2" + [[deps.IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl"] -git-tree-sha1 = "10bd689145d2c3b2a9844005d01087cc1194e79e" +git-tree-sha1 = "0f14a5456bdc6b9731a5682f439a672750a09e48" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2024.2.1+0" +version = "2025.0.4+0" [[deps.InteractiveUtils]] deps = ["Markdown"] uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240" +version = "1.11.0" [[deps.Interpolations]] deps = ["Adapt", "AxisAlgorithms", "ChainRulesCore", "LinearAlgebra", "OffsetArrays", "Random", "Ratios", "Requires", "SharedArrays", "SparseArrays", "StaticArrays", "WoodburyMatrices"] @@ -1090,9 +1179,9 @@ weakdeps = ["Random", "RecipesBase", "Statistics"] IntervalSetsStatisticsExt = "Statistics" [[deps.InverseFunctions]] -git-tree-sha1 = "2787db24f4e03daf859c6509ff87764e4182f7d1" +git-tree-sha1 = "a779299d77cd080bf77b97535acecd73e1c5e5cb" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.16" +version = "0.1.17" weakdeps = ["Dates", "Test"] [deps.InverseFunctions.extensions] @@ -1100,9 +1189,9 @@ weakdeps = ["Dates", "Test"] InverseFunctionsTestExt = "Test" [[deps.IrrationalConstants]] -git-tree-sha1 = "630b497eafcc20001bba38a4651b327dcfc491d2" +git-tree-sha1 = "e2222959fbc6c19554dc15174c81bf7bf3aa691c" uuid = "92d709cd-6900-40b7-9082-c6be49f344b6" -version = "0.2.2" +version = "0.2.4" [[deps.IterTools]] git-tree-sha1 = "42d5f897009e7ff2cf88db414a389e5ed1bdd023" @@ -1116,15 +1205,15 @@ version = "1.0.0" [[deps.JLFzf]] deps = ["Pipe", "REPL", "Random", "fzf_jll"] -git-tree-sha1 = "39d64b09147620f5ffbf6b2d3255be3c901bec63" +git-tree-sha1 = "71b48d857e86bf7a1838c4736545699974ce79a2" uuid = "1019f520-868f-41f5-a6de-eb00f4b6a39c" -version = "0.1.8" +version = "0.1.9" [[deps.JLLWrappers]] deps = ["Artifacts", "Preferences"] -git-tree-sha1 = "f389674c99bfcde17dc57454011aa44d5a260a40" +git-tree-sha1 = "a007feb38b422fbdab534406aeca1b86823cb4d6" uuid = "692b3bcd-3c85-4b1f-b108-f13ce0eb3210" -version = "1.6.0" +version = "1.7.0" [[deps.JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] @@ -1132,36 +1221,36 @@ git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" version = "0.21.4" +[[deps.Jieko]] +deps = ["ExproniconLite"] +git-tree-sha1 = "2f05ed29618da60c06a87e9c033982d4f71d0b6c" +uuid = "ae98c720-c025-4a4a-838c-29b094483192" +version = "0.2.1" + [[deps.JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "c84a835e1a09b289ffcd2271bf2a337bbdda6637" +git-tree-sha1 = "eac1206917768cb54957c65a615460d87b455fc1" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" -version = "3.0.3+0" +version = "3.1.1+0" [[deps.JuliaFormatter]] deps = ["CSTParser", "CommonMark", "DataStructures", "Glob", "PrecompileTools", "TOML", "Tokenize"] -git-tree-sha1 = "bb4696471330275adfd6c78c6173f276e8c067aa" +git-tree-sha1 = "59cf7ad64f1b0708a4fa4369879d33bad3239b56" uuid = "98e50ef6-434e-11e9-1051-2b60c6c9e899" -version = "1.0.60" +version = "1.0.62" [[deps.JumpProcesses]] deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "FunctionWrappers", "Graphs", "LinearAlgebra", "Markdown", "PoissonRandom", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "Setfield", "StaticArrays", "SymbolicIndexingInterface", "UnPack"] -git-tree-sha1 = "6e0fb267f2c869df59b6bf9f8cb0f2794f2d85e9" +git-tree-sha1 = "3ba034493e21efc9ba61268dc0faa0c383bb76a5" uuid = "ccbc3e58-028d-4f4c-8cd5-9ae44345cda5" -version = "9.13.7" +version = "9.14.2" weakdeps = ["FastBroadcast"] -[[deps.KLU]] -deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"] -git-tree-sha1 = "07649c499349dad9f08dde4243a4c597064663e9" -uuid = "ef3ab10e-7fda-4108-b977-705223b18434" -version = "0.6.0" - [[deps.Krylov]] deps = ["LinearAlgebra", "Printf", "SparseArrays"] -git-tree-sha1 = "267dad6b4b7b5d529c76d40ff48d33f7e94cb834" +git-tree-sha1 = "b29d37ce30fa401a4563b18880ab91f979a29734" uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7" -version = "0.9.6" +version = "0.9.10" [[deps.LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -1170,16 +1259,16 @@ uuid = "c1c5ebd0-6772-5130-a774-d5fcae4a789d" version = "3.100.2+0" [[deps.LERC_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "bf36f528eec6634efc60d7ec062008f171071434" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "aaafe88dccbd957a8d82f7d05be9b69172e0cee3" uuid = "88015f11-f218-50d7-93a8-a6af411a945d" -version = "3.0.0+1" +version = "4.0.1+0" [[deps.LLVMOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "e16271d212accd09d52ee0ae98956b8a05c4b626" +git-tree-sha1 = "78211fb6cbc872f77cad3fc0b6cf647d923f4929" uuid = "1d63c593-3942-5779-bab2-d838dc0a180e" -version = "17.0.6+0" +version = "18.1.7+0" [[deps.LSODA]] deps = ["Compat", "DiffEqBase", "LSODA_jll", "LinearAlgebra", "Parameters", "Printf", "SciMLBase"] @@ -1195,31 +1284,20 @@ version = "0.1.2+0" [[deps.LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "70c5da094887fd2cae843b8db33920bac4b6f07d" +git-tree-sha1 = "1c602b1127f4751facb671441ca72715cc95938a" uuid = "dd4b983a-f0e5-5f8d-a1b7-129d4a5fb1ac" -version = "2.10.2+0" +version = "2.10.3+0" [[deps.LaTeXStrings]] -git-tree-sha1 = "50901ebc375ed41dbf8058da26f9de442febbbec" +git-tree-sha1 = "dda21b8cbd6a6c40d9d02a73230f9d70fed6918c" uuid = "b964fa9f-0449-5b57-a5c2-d3ea65f4040f" -version = "1.3.1" - -[[deps.LabelledArrays]] -deps = ["ArrayInterface", "ChainRulesCore", "ForwardDiff", "LinearAlgebra", "MacroTools", "PreallocationTools", "RecursiveArrayTools", "StaticArrays"] -git-tree-sha1 = "e459fda6b68ea8684b3fcd513d2fd1e5130c4402" -uuid = "2ee39098-c373-598a-b85f-a56591580800" -version = "1.16.0" - -[[deps.LambertW]] -git-tree-sha1 = "c5ffc834de5d61d00d2b0e18c96267cffc21f648" -uuid = "984bce1d-4616-540c-a9ee-88d1112d94c9" -version = "0.4.6" +version = "1.4.0" [[deps.Latexify]] deps = ["Format", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Requires"] -git-tree-sha1 = "ce5f5621cac23a86011836badfedf664a612cee4" +git-tree-sha1 = "cd714447457c660382fe634710fb56eb255ee42e" uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" -version = "0.16.5" +version = "0.16.6" [deps.Latexify.extensions] DataFramesExt = "DataFrames" @@ -1239,9 +1317,9 @@ version = "0.1.17" [[deps.LazyArrays]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "MacroTools", "SparseArrays"] -git-tree-sha1 = "360f6039babd6e4d6364eff0d4fc9120834a2d9a" +git-tree-sha1 = "866ce84b15e54d758c11946aacd4e5df0e60b7a3" uuid = "5078a376-72f3-5289-bfd5-ec5146d43c02" -version = "2.2.1" +version = "2.6.1" [deps.LazyArrays.extensions] LazyArraysBandedMatricesExt = "BandedMatrices" @@ -1258,6 +1336,7 @@ version = "2.2.1" [[deps.LazyArtifacts]] deps = ["Artifacts", "Pkg"] uuid = "4af54fe1-eca0-43a8-85a7-787d91b784e3" +version = "1.11.0" [[deps.LeftChildRightSiblingTrees]] deps = ["AbstractTrees"] @@ -1273,16 +1352,17 @@ version = "0.6.4" [[deps.LibCURL_jll]] deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Zlib_jll", "nghttp2_jll"] uuid = "deac9b47-8bc7-5906-a0fe-35ac56dc84c0" -version = "8.4.0+0" +version = "8.6.0+0" [[deps.LibGit2]] deps = ["Base64", "LibGit2_jll", "NetworkOptions", "Printf", "SHA"] uuid = "76f85450-5226-5b5a-8eaa-529ad045b433" +version = "1.11.0" [[deps.LibGit2_jll]] deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll"] uuid = "e37daf67-58a4-590a-8e99-b0245dd2ffc5" -version = "1.6.4+0" +version = "1.7.2+0" [[deps.LibSSH2_jll]] deps = ["Artifacts", "Libdl", "MbedTLS_jll"] @@ -1291,54 +1371,65 @@ version = "1.11.0+1" [[deps.Libdl]] uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb" +version = "1.11.0" [[deps.Libffi_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "0b4a5d71f3e5200a7dff793393e09dfc2d874290" +git-tree-sha1 = "27ecae93dd25ee0909666e6835051dd684cc035e" uuid = "e9f186c6-92d2-5b65-8a66-fee21dc1b490" -version = "3.2.2+1" +version = "3.2.2+2" [[deps.Libgcrypt_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgpg_error_jll"] -git-tree-sha1 = "9fd170c4bbfd8b935fdc5f8b7aa33532c991a673" +git-tree-sha1 = "8be878062e0ffa2c3f67bb58a595375eda5de80b" uuid = "d4300ac3-e22c-5743-9152-c294e39db1e4" -version = "1.8.11+0" +version = "1.11.0+0" [[deps.Libglvnd_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll", "Xorg_libXext_jll"] -git-tree-sha1 = "6f73d1dd803986947b2c750138528a999a6c7733" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libX11_jll", "Xorg_libXext_jll"] +git-tree-sha1 = "ff3b4b9d35de638936a525ecd36e86a8bb919d11" uuid = "7e76a0d4-f3c7-5321-8279-8d96eeed0f29" -version = "1.6.0+0" +version = "1.7.0+0" [[deps.Libgpg_error_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "fbb1f2bef882392312feb1ede3615ddc1e9b99ed" +git-tree-sha1 = "df37206100d39f79b3376afb6b9cee4970041c61" uuid = "7add5ba3-2f88-524e-9cd5-f83b8a55f7b8" -version = "1.49.0+0" +version = "1.51.1+0" [[deps.Libiconv_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "f9557a255370125b405568f9767d6d195822a175" +git-tree-sha1 = "be484f5c92fad0bd8acfef35fe017900b0b73809" uuid = "94ce4f54-9a6c-5748-9c1c-f9c7231a4531" -version = "1.17.0+0" +version = "1.18.0+0" [[deps.Libmount_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "0c4f9c4f1a50d8f35048fa0532dabbadf702f81e" +git-tree-sha1 = "89211ea35d9df5831fca5d33552c02bd33878419" uuid = "4b2f31a3-9ecc-558c-b454-b3730dcb73e9" -version = "2.40.1+0" +version = "2.40.3+0" [[deps.Libtiff_jll]] deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "LERC_jll", "Libdl", "XZ_jll", "Zlib_jll", "Zstd_jll"] -git-tree-sha1 = "2da088d113af58221c52828a80378e16be7d037a" +git-tree-sha1 = "4ab7581296671007fc33f07a721631b8855f4b1d" uuid = "89763e89-9b03-5906-acba-b20f662cd828" -version = "4.5.1+1" +version = "4.7.1+0" [[deps.Libuuid_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "5ee6203157c120d79034c748a2acba45b82b8807" +git-tree-sha1 = "e888ad02ce716b319e6bdb985d2ef300e7089889" uuid = "38a345b3-de98-5d2b-a5d3-14cd9215e700" -version = "2.40.1+0" +version = "2.40.3+0" + +[[deps.LineSearch]] +deps = ["ADTypes", "CommonSolve", "ConcreteStructs", "FastClosures", "LinearAlgebra", "MaybeInplace", "SciMLBase", "SciMLJacobianOperators", "StaticArraysCore"] +git-tree-sha1 = "97d502765cc5cf3a722120f50da03c2474efce04" +uuid = "87fe0de2-c867-4266-b59a-2f0a94fc965b" +version = "0.1.4" +weakdeps = ["LineSearches"] + + [deps.LineSearch.extensions] + LineSearchLineSearchesExt = "LineSearches" [[deps.LineSearches]] deps = ["LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "Printf"] @@ -1349,49 +1440,55 @@ version = "7.3.0" [[deps.LinearAlgebra]] deps = ["Libdl", "OpenBLAS_jll", "libblastrampoline_jll"] uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" +version = "1.11.0" [[deps.LinearSolve]] -deps = ["ArrayInterface", "ChainRulesCore", "ConcreteStructs", "DocStringExtensions", "EnumX", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "LazyArrays", "Libdl", "LinearAlgebra", "MKL_jll", "Markdown", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "StaticArraysCore", "UnPack"] -git-tree-sha1 = "6c5e4555ac2bc449a28604e184f759d18fc08420" +deps = ["ArrayInterface", "ChainRulesCore", "ConcreteStructs", "DocStringExtensions", "EnumX", "GPUArraysCore", "InteractiveUtils", "Krylov", "LazyArrays", "Libdl", "LinearAlgebra", "MKL_jll", "Markdown", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "StaticArraysCore", "UnPack"] +git-tree-sha1 = "d6cb226ec0ce36a5d71795cf523370f2410ff95d" uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" -version = "2.34.0" +version = "3.6.0" [deps.LinearSolve.extensions] LinearSolveBandedMatricesExt = "BandedMatrices" LinearSolveBlockDiagonalsExt = "BlockDiagonals" LinearSolveCUDAExt = "CUDA" LinearSolveCUDSSExt = "CUDSS" - LinearSolveEnzymeExt = ["Enzyme", "EnzymeCore"] - LinearSolveFastAlmostBandedMatricesExt = ["FastAlmostBandedMatrices"] + LinearSolveEnzymeExt = "EnzymeCore" + LinearSolveFastAlmostBandedMatricesExt = "FastAlmostBandedMatrices" + LinearSolveFastLapackInterfaceExt = "FastLapackInterface" LinearSolveHYPREExt = "HYPRE" LinearSolveIterativeSolversExt = "IterativeSolvers" LinearSolveKernelAbstractionsExt = "KernelAbstractions" LinearSolveKrylovKitExt = "KrylovKit" LinearSolveMetalExt = "Metal" - LinearSolvePardisoExt = "Pardiso" - LinearSolveRecursiveArrayToolsExt = "RecursiveArrayTools" + LinearSolvePardisoExt = ["Pardiso", "SparseArrays"] + LinearSolveRecursiveFactorizationExt = "RecursiveFactorization" + LinearSolveSparseArraysExt = "SparseArrays" + LinearSolveSparspakExt = ["SparseArrays", "Sparspak"] [deps.LinearSolve.weakdeps] BandedMatrices = "aae01518-5342-5314-be14-df237901396f" BlockDiagonals = "0a1fb500-61f7-11e9-3c65-f5ef3456f9f0" CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba" CUDSS = "45b445bb-4962-46a0-9369-b4df9d0f772e" - Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9" EnzymeCore = "f151be2c-9106-41f4-ab19-57ee4f262869" FastAlmostBandedMatrices = "9d29842c-ecb8-4973-b1e9-a27b1157504e" + FastLapackInterface = "29a986be-02c6-4525-aec4-84b980013641" HYPRE = "b5ffcf37-a2bd-41ab-a3da-4bd9bc8ad771" IterativeSolvers = "42fd0dbc-a981-5370-80f2-aaf504508153" KernelAbstractions = "63c18a36-062a-441e-b654-da1e3ab1ce7c" KrylovKit = "0b1a1467-8014-51b9-945f-bf0ae24f4b77" Metal = "dde4c033-4e86-420c-a63e-0dd931031962" Pardiso = "46dd5b70-b6fb-5a00-ae2d-e8fea33afaf2" - RecursiveArrayTools = "731186ca-8d62-57ce-b412-fbd966d074cd" + RecursiveFactorization = "f2c3362d-daeb-58d1-803e-2bc74f2840b4" + SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" + Sparspak = "e56a9233-b9d6-4f03-8d0f-1825330902ac" [[deps.LogExpFunctions]] deps = ["DocStringExtensions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "a2d09619db4e765091ee5c6ffe8872849de0feea" +git-tree-sha1 = "13ca9e2586b89836fd20cccf56e57e2b9ae7f38f" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.28" +version = "0.3.29" [deps.LogExpFunctions.extensions] LogExpFunctionsChainRulesCoreExt = "ChainRulesCore" @@ -1405,12 +1502,13 @@ version = "0.3.28" [[deps.Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" +version = "1.11.0" [[deps.LoggingExtras]] deps = ["Dates", "Logging"] -git-tree-sha1 = "c1dd6d7978c12545b4179fb6153b9250c96b0075" +git-tree-sha1 = "f02b56007b064fbfddb4c9cd60161b6dd0f40df3" uuid = "e6f89c97-d47a-5376-807f-9c37f3926c36" -version = "1.0.3" +version = "1.1.0" [[deps.LoopVectorization]] deps = ["ArrayInterface", "CPUSummary", "CloseOpenIntervals", "DocStringExtensions", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "PrecompileTools", "SIMDTypes", "SLEEFPirates", "Static", "StaticArrayInterface", "ThreadingUtilities", "UnPack", "VectorizationBase"] @@ -1425,9 +1523,9 @@ weakdeps = ["ChainRulesCore", "ForwardDiff", "SpecialFunctions"] [[deps.MKL_jll]] deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "oneTBB_jll"] -git-tree-sha1 = "f046ccd0c6db2832a9f639e2c669c6fe867e5f4f" +git-tree-sha1 = "5de60bc6cb3899cd318d80d627560fae2e2d99ae" uuid = "856f044c-d86e-5d09-b602-aeab76dc8ba7" -version = "2024.2.0+0" +version = "2025.0.1+1" [[deps.MLStyle]] git-tree-sha1 = "bc38dff0548128765760c79eb7388a4b37fae2c8" @@ -1437,13 +1535,13 @@ version = "0.4.17" [[deps.MPFR_jll]] deps = ["Artifacts", "GMP_jll", "Libdl"] uuid = "3a97d323-0669-5f0c-9066-3539efd106a3" -version = "4.2.0+1" +version = "4.2.1+0" [[deps.MPICH_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Hwloc_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"] -git-tree-sha1 = "19d4bd098928a3263693991500d05d74dbdc2004" +git-tree-sha1 = "3aa3210044138a1749dbd350a9ba8680869eb503" uuid = "7cb0a576-ebde-5e09-9194-50597f1243b4" -version = "4.2.2+0" +version = "4.3.0+1" [[deps.MPIPreferences]] deps = ["Libdl", "Preferences"] @@ -1453,15 +1551,14 @@ version = "0.1.11" [[deps.MPItrampoline_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"] -git-tree-sha1 = "8c35d5420193841b2f367e658540e8d9e0601ed0" +git-tree-sha1 = "ff91ca13c7c472cef700f301c8d752bc2aaff1a8" uuid = "f1f71cc9-e9ae-5b93-9b94-4fe0e1ad3748" -version = "5.4.0+0" +version = "5.5.3+0" [[deps.MacroTools]] -deps = ["Markdown", "Random"] -git-tree-sha1 = "2fa9ee3e63fd3a4f7a9a4f4744a52f4856de82df" +git-tree-sha1 = "72aebe0b5051e5143a079a4685a46da330a40472" uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" -version = "0.5.13" +version = "0.5.15" [[deps.ManualMemory]] git-tree-sha1 = "bcaef4fc7a0cfe2cba636d84cda54b5e4e4ca3cd" @@ -1471,6 +1568,7 @@ version = "0.1.8" [[deps.Markdown]] deps = ["Base64"] uuid = "d6f4376e-aef5-505a-96c1-9c027394607a" +version = "1.11.0" [[deps.MaybeInplace]] deps = ["ArrayInterface", "LinearAlgebra", "MacroTools"] @@ -1491,7 +1589,7 @@ version = "1.1.9" [[deps.MbedTLS_jll]] deps = ["Artifacts", "Libdl"] uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1" -version = "2.28.2+1" +version = "2.28.6+0" [[deps.Measures]] git-tree-sha1 = "c13304c81eec1ed3af7fc20e75fb6b26092a1102" @@ -1500,15 +1598,15 @@ version = "0.3.2" [[deps.MethodOfLines]] deps = ["Combinatorics", "DiffEqBase", "DomainSets", "IfElse", "Interpolations", "Latexify", "LinearAlgebra", "ModelingToolkit", "OrdinaryDiffEq", "PDEBase", "PrecompileTools", "RuntimeGeneratedFunctions", "SciMLBase", "StaticArrays", "SymbolicIndexingInterface", "SymbolicUtils", "Symbolics", "TermInterface"] -git-tree-sha1 = "124bbb1d019b321e8b176bdd9bdbf2a8c6d69bb4" +git-tree-sha1 = "f872370a39da2a79bcae3d7b311a8008de6f0f13" uuid = "94925ecb-adb7-4558-8ed8-f975c56a0bf4" -version = "0.11.3" +version = "0.11.7" [[deps.MicrosoftMPI_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "f12a29c4400ba812841c6ace3f4efbb6dbb3ba01" +git-tree-sha1 = "bc95bf4149bf535c09602e3acdf950d9b4376227" uuid = "9237b28f-5490-5468-be7b-bb81f5f5e6cf" -version = "10.1.4+2" +version = "10.1.4+3" [[deps.Missings]] deps = ["DataAPI"] @@ -1518,24 +1616,39 @@ version = "1.2.0" [[deps.Mmap]] uuid = "a63ad114-7e13-5084-954f-fe012c677804" +version = "1.11.0" [[deps.ModelingToolkit]] -deps = ["AbstractTrees", "ArrayInterface", "Combinatorics", "Compat", "ConstructionBase", "DataStructures", "DiffEqBase", "DiffEqCallbacks", "DiffEqNoiseProcess", "DiffRules", "Distributed", "Distributions", "DocStringExtensions", "DomainSets", "DynamicQuantities", "ExprTools", "Expronicon", "FindFirstFunctions", "ForwardDiff", "FunctionWrappersWrappers", "Graphs", "InteractiveUtils", "JuliaFormatter", "JumpProcesses", "LabelledArrays", "Latexify", "Libdl", "LinearAlgebra", "MLStyle", "NaNMath", "NonlinearSolve", "OrderedCollections", "PrecompileTools", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLBase", "SciMLStructures", "Serialization", "Setfield", "SimpleNonlinearSolve", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicIndexingInterface", "SymbolicUtils", "Symbolics", "URIs", "UnPack", "Unitful"] -git-tree-sha1 = "9199a56fa74c0d64e0023dc99201f5a602a3890f" +deps = ["AbstractTrees", "ArrayInterface", "BlockArrays", "Combinatorics", "CommonSolve", "Compat", "ConstructionBase", "DataStructures", "DiffEqBase", "DiffEqCallbacks", "DiffEqNoiseProcess", "DiffRules", "Distributed", "Distributions", "DocStringExtensions", "DomainSets", "DynamicQuantities", "EnumX", "ExprTools", "FindFirstFunctions", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "Graphs", "InteractiveUtils", "JuliaFormatter", "JumpProcesses", "Latexify", "Libdl", "LinearAlgebra", "MLStyle", "Moshi", "NaNMath", "NonlinearSolve", "OffsetArrays", "OrderedCollections", "PrecompileTools", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SCCNonlinearSolve", "SciMLBase", "SciMLStructures", "Serialization", "Setfield", "SimpleNonlinearSolve", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicIndexingInterface", "SymbolicUtils", "Symbolics", "URIs", "UnPack", "Unitful"] +git-tree-sha1 = "07376ec5c66232540dbcf1bc0f8ae37fcf4cac88" uuid = "961ee093-0014-501f-94e3-6117800e7a78" -version = "9.32.0" +version = "9.68.0" [deps.ModelingToolkit.extensions] MTKBifurcationKitExt = "BifurcationKit" + MTKChainRulesCoreExt = "ChainRulesCore" MTKDeepDiffsExt = "DeepDiffs" + MTKFMIExt = "FMI" + MTKInfiniteOptExt = "InfiniteOpt" + MTKLabelledArraysExt = "LabelledArrays" [deps.ModelingToolkit.weakdeps] BifurcationKit = "0f109fa4-8a5d-4b75-95aa-f515264e7665" + ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" DeepDiffs = "ab62b9b5-e342-54a8-a765-a90f495de1a6" + FMI = "14a09403-18e3-468f-ad8a-74f8dda2d9ac" + InfiniteOpt = "20393b10-9daf-11e9-18c9-8db751c92c57" + LabelledArrays = "2ee39098-c373-598a-b85f-a56591580800" + +[[deps.Moshi]] +deps = ["ExproniconLite", "Jieko"] +git-tree-sha1 = "453de0fc2be3d11b9b93ca4d0fddd91196dcf1ed" +uuid = "2e0e35c7-a2e4-4343-998d-7ef72827ed2d" +version = "0.3.5" [[deps.MozillaCACerts_jll]] uuid = "14a3606d-f60d-562e-9121-12d972cd8159" -version = "2023.1.10" +version = "2023.12.12" [[deps.MuladdMacro]] git-tree-sha1 = "cac9cc5499c25554cba55cd3c30543cff5ca4fab" @@ -1544,9 +1657,9 @@ version = "0.2.4" [[deps.MultivariatePolynomials]] deps = ["ChainRulesCore", "DataStructures", "LinearAlgebra", "MutableArithmetics"] -git-tree-sha1 = "5c1d1d9361e1417e5a065e1f84dc3686cbdaea21" +git-tree-sha1 = "8d39779e29f80aa6c071e7ac17101c6e31f075d7" uuid = "102ac46a-7ee4-5c85-9060-abc95bfdeaa3" -version = "0.5.6" +version = "0.5.7" [[deps.Mustache]] deps = ["Printf", "Tables"] @@ -1556,15 +1669,15 @@ version = "1.0.20" [[deps.MutableArithmetics]] deps = ["LinearAlgebra", "SparseArrays", "Test"] -git-tree-sha1 = "d0a6b1096b584a2b88efb70a92f8cb8c881eb38a" +git-tree-sha1 = "491bdcdc943fcbc4c005900d7463c9f216aabf4c" uuid = "d8a4904e-b15c-11e9-3269-09a3773c0cb0" -version = "1.4.6" +version = "1.6.4" [[deps.NLSolversBase]] -deps = ["DiffResults", "Distributed", "FiniteDiff", "ForwardDiff"] -git-tree-sha1 = "a0b464d183da839699f4c79e7606d9d186ec172c" +deps = ["ADTypes", "DifferentiationInterface", "Distributed", "FiniteDiff", "ForwardDiff"] +git-tree-sha1 = "1f78293864c5e48ecf97269b0e23d7be28eb1958" uuid = "d41bc354-129a-5804-8e4c-c37616107c6c" -version = "7.8.3" +version = "7.9.0" [[deps.NLsolve]] deps = ["Distances", "LineSearches", "LinearAlgebra", "NLSolversBase", "Printf", "Reexport"] @@ -1574,45 +1687,87 @@ version = "4.5.1" [[deps.NaNMath]] deps = ["OpenLibm_jll"] -git-tree-sha1 = "0877504529a3e5c3343c6f8b4c0381e57e4387e4" +git-tree-sha1 = "cc0a5deefdb12ab3a096f00a6d42133af4560d71" uuid = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3" -version = "1.0.2" +version = "1.1.2" [[deps.NetworkOptions]] uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" version = "1.2.0" [[deps.NonlinearSolve]] -deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "LazyArrays", "LineSearches", "LinearAlgebra", "LinearSolve", "MaybeInplace", "PrecompileTools", "Preferences", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "SymbolicIndexingInterface", "TimerOutputs"] -git-tree-sha1 = "bcd8812e751326ff1d4b2dd50764b93df51f143b" +deps = ["ADTypes", "ArrayInterface", "BracketingNonlinearSolve", "CommonSolve", "ConcreteStructs", "DiffEqBase", "DifferentiationInterface", "FastClosures", "FiniteDiff", "ForwardDiff", "LineSearch", "LinearAlgebra", "LinearSolve", "NonlinearSolveBase", "NonlinearSolveFirstOrder", "NonlinearSolveQuasiNewton", "NonlinearSolveSpectralMethods", "PrecompileTools", "Preferences", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseMatrixColorings", "StaticArraysCore", "SymbolicIndexingInterface"] +git-tree-sha1 = "eb1007ce104fc6704ac346859bc53976c44edc38" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "3.14.0" +version = "4.5.0" [deps.NonlinearSolve.extensions] - NonlinearSolveBandedMatricesExt = "BandedMatrices" NonlinearSolveFastLevenbergMarquardtExt = "FastLevenbergMarquardt" NonlinearSolveFixedPointAccelerationExt = "FixedPointAcceleration" NonlinearSolveLeastSquaresOptimExt = "LeastSquaresOptim" NonlinearSolveMINPACKExt = "MINPACK" NonlinearSolveNLSolversExt = "NLSolvers" - NonlinearSolveNLsolveExt = "NLsolve" + NonlinearSolveNLsolveExt = ["NLsolve", "LineSearches"] + NonlinearSolvePETScExt = ["PETSc", "MPI"] NonlinearSolveSIAMFANLEquationsExt = "SIAMFANLEquations" NonlinearSolveSpeedMappingExt = "SpeedMapping" - NonlinearSolveSymbolicsExt = "Symbolics" - NonlinearSolveZygoteExt = "Zygote" + NonlinearSolveSundialsExt = "Sundials" [deps.NonlinearSolve.weakdeps] - BandedMatrices = "aae01518-5342-5314-be14-df237901396f" FastLevenbergMarquardt = "7a0df574-e128-4d35-8cbd-3d84502bf7ce" FixedPointAcceleration = "817d07cb-a79a-5c30-9a31-890123675176" LeastSquaresOptim = "0fc2ff8b-aaa3-5acd-a817-1944a5e08891" + LineSearches = "d3d80556-e9d4-5f37-9878-2ab0fcc64255" MINPACK = "4854310b-de5a-5eb6-a2a5-c1dee2bd17f9" + MPI = "da04e1cc-30fd-572f-bb4f-1f8673147195" NLSolvers = "337daf1e-9722-11e9-073e-8b9effe078ba" NLsolve = "2774e3e8-f4cf-5e23-947b-6d7e65073b56" + PETSc = "ace2c81b-2b5f-4b1e-a30d-d662738edfe0" SIAMFANLEquations = "084e46ad-d928-497d-ad5e-07fa361a48c4" SpeedMapping = "f1835b91-879b-4a3f-a438-e4baacf14412" - Symbolics = "0c5d862f-8b57-4792-8d23-62f2024744c7" - Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" + Sundials = "c3572dad-4567-51f8-b174-8c6c989267f4" + +[[deps.NonlinearSolveBase]] +deps = ["ADTypes", "Adapt", "ArrayInterface", "CommonSolve", "Compat", "ConcreteStructs", "DifferentiationInterface", "EnzymeCore", "FastClosures", "LinearAlgebra", "Markdown", "MaybeInplace", "Preferences", "Printf", "RecursiveArrayTools", "SciMLBase", "SciMLJacobianOperators", "SciMLOperators", "StaticArraysCore", "SymbolicIndexingInterface", "TimerOutputs"] +git-tree-sha1 = "8a2437b5ead050301b6a6258f226e5137e511000" +uuid = "be0214bd-f91f-a760-ac4e-3421ce2b2da0" +version = "1.5.0" +weakdeps = ["BandedMatrices", "DiffEqBase", "ForwardDiff", "LineSearch", "LinearSolve", "SparseArrays", "SparseMatrixColorings"] + + [deps.NonlinearSolveBase.extensions] + NonlinearSolveBaseBandedMatricesExt = "BandedMatrices" + NonlinearSolveBaseDiffEqBaseExt = "DiffEqBase" + NonlinearSolveBaseForwardDiffExt = "ForwardDiff" + NonlinearSolveBaseLineSearchExt = "LineSearch" + NonlinearSolveBaseLinearSolveExt = "LinearSolve" + NonlinearSolveBaseSparseArraysExt = "SparseArrays" + NonlinearSolveBaseSparseMatrixColoringsExt = "SparseMatrixColorings" + +[[deps.NonlinearSolveFirstOrder]] +deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConcreteStructs", "DiffEqBase", "FiniteDiff", "ForwardDiff", "LineSearch", "LinearAlgebra", "LinearSolve", "MaybeInplace", "NonlinearSolveBase", "PrecompileTools", "Reexport", "SciMLBase", "SciMLJacobianOperators", "Setfield", "StaticArraysCore"] +git-tree-sha1 = "aade7ab02ee4c80ec30dc8a2874fc67155c935f1" +uuid = "5959db7a-ea39-4486-b5fe-2dd0bf03d60d" +version = "1.3.0" + +[[deps.NonlinearSolveQuasiNewton]] +deps = ["ArrayInterface", "CommonSolve", "ConcreteStructs", "DiffEqBase", "LinearAlgebra", "LinearSolve", "MaybeInplace", "NonlinearSolveBase", "PrecompileTools", "Reexport", "SciMLBase", "SciMLOperators", "StaticArraysCore"] +git-tree-sha1 = "44a132cb32aeafcb35a6238fd91a2f3f8ff5c5b0" +uuid = "9a2c21bd-3a47-402d-9113-8faf9a0ee114" +version = "1.2.0" +weakdeps = ["ForwardDiff"] + + [deps.NonlinearSolveQuasiNewton.extensions] + NonlinearSolveQuasiNewtonForwardDiffExt = "ForwardDiff" + +[[deps.NonlinearSolveSpectralMethods]] +deps = ["CommonSolve", "ConcreteStructs", "DiffEqBase", "LineSearch", "MaybeInplace", "NonlinearSolveBase", "PrecompileTools", "Reexport", "SciMLBase"] +git-tree-sha1 = "f28b1ab17b5f15eb2b174eaf8813cf17f0b3e6c0" +uuid = "26075421-4e9a-44e1-8bd1-420ed7ad02b2" +version = "1.1.0" +weakdeps = ["ForwardDiff"] + + [deps.NonlinearSolveSpectralMethods.extensions] + NonlinearSolveSpectralMethodsForwardDiffExt = "ForwardDiff" [[deps.ODEInterface]] deps = ["Dates", "Libdl", "LinearAlgebra", "Markdown", "ODEInterface_jll", "Unicode"] @@ -1622,9 +1777,9 @@ version = "0.5.0" [[deps.ODEInterfaceDiffEq]] deps = ["Compat", "DataStructures", "DiffEqBase", "FunctionWrappers", "LinearAlgebra", "ODEInterface", "Reexport", "SciMLBase"] -git-tree-sha1 = "a4816454042d72e4bae37d13e592591381356a17" +git-tree-sha1 = "598df5118c036a8ac8a53c5d158921eba5fc0d32" uuid = "09606e27-ecf5-54fc-bb29-004bd9f985bf" -version = "3.13.3" +version = "3.13.4" [[deps.ODEInterface_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1633,9 +1788,9 @@ uuid = "c771fb93-2439-5ece-a3b3-58fecce82101" version = "0.0.1+0" [[deps.OffsetArrays]] -git-tree-sha1 = "1a27764e945a152f7ca7efa04de513d473e9542e" +git-tree-sha1 = "a414039192a155fb38c4599a60110f0018c6ec82" uuid = "6fe1bfb0-de20-5000-8ca7-80f57d26f881" -version = "1.14.1" +version = "1.16.0" weakdeps = ["Adapt"] [deps.OffsetArrays.extensions] @@ -1650,7 +1805,7 @@ version = "1.3.5+1" [[deps.OpenBLAS_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"] uuid = "4536629a-c528-5b80-bd46-f80d51c5b363" -version = "0.3.23+4" +version = "0.3.27+1" [[deps.OpenLibm_jll]] deps = ["Artifacts", "Libdl"] @@ -1659,9 +1814,9 @@ version = "0.8.1+2" [[deps.OpenMPI_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Hwloc_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML", "Zlib_jll"] -git-tree-sha1 = "bfce6d523861a6c562721b262c0d1aaeead2647f" +git-tree-sha1 = "da913f03f17b449951e0461da960229d4a3d1a8c" uuid = "fe0851c0-eecd-5654-98d4-656369965a5c" -version = "5.0.5+0" +version = "5.0.7+1" [[deps.OpenSSL]] deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] @@ -1671,21 +1826,21 @@ version = "1.4.3" [[deps.OpenSSL_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "1b35263570443fdd9e76c76b7062116e2f374ab8" +git-tree-sha1 = "a9697f1d06cc3eb3fb3ad49cc67f2cfabaac31ea" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "3.0.15+0" +version = "3.0.16+0" [[deps.OpenSpecFun_jll]] -deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "13652491f6856acfd2db29360e1bbcd4565d04f1" +deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl"] +git-tree-sha1 = "1346c9208249809840c91b26703912dff463d335" uuid = "efe28fd5-8261-553b-a9e1-b2916fc3738e" -version = "0.5.5+0" +version = "0.5.6+0" [[deps.Optim]] deps = ["Compat", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"] -git-tree-sha1 = "d9b79c4eed437421ac4285148fcadf42e0700e89" +git-tree-sha1 = "c1f51f704f689f87f28b33836fd460ecf9b34583" uuid = "429524aa-4258-5aef-a3af-852621145aeb" -version = "1.9.4" +version = "1.11.0" [deps.Optim.extensions] OptimMOIExt = "MathOptInterface" @@ -1700,49 +1855,49 @@ uuid = "91d4177d-7536-5919-b921-800302f37372" version = "1.3.3+0" [[deps.OrderedCollections]] -git-tree-sha1 = "dfdf5519f235516220579f949664f1bf44e741c5" +git-tree-sha1 = "cc4054e898b852042d7b503313f7ad03de99c3dd" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.6.3" +version = "1.8.0" [[deps.OrdinaryDiffEq]] deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "EnumX", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FillArrays", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "MacroTools", "MuladdMacro", "NonlinearSolve", "OrdinaryDiffEqAdamsBashforthMoulton", "OrdinaryDiffEqBDF", "OrdinaryDiffEqCore", "OrdinaryDiffEqDefault", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqExplicitRK", "OrdinaryDiffEqExponentialRK", "OrdinaryDiffEqExtrapolation", "OrdinaryDiffEqFIRK", "OrdinaryDiffEqFeagin", "OrdinaryDiffEqFunctionMap", "OrdinaryDiffEqHighOrderRK", "OrdinaryDiffEqIMEXMultistep", "OrdinaryDiffEqLinear", "OrdinaryDiffEqLowOrderRK", "OrdinaryDiffEqLowStorageRK", "OrdinaryDiffEqNonlinearSolve", "OrdinaryDiffEqNordsieck", "OrdinaryDiffEqPDIRK", "OrdinaryDiffEqPRK", "OrdinaryDiffEqQPRK", "OrdinaryDiffEqRKN", "OrdinaryDiffEqRosenbrock", "OrdinaryDiffEqSDIRK", "OrdinaryDiffEqSSPRK", "OrdinaryDiffEqStabilizedIRK", "OrdinaryDiffEqStabilizedRK", "OrdinaryDiffEqSymplecticRK", "OrdinaryDiffEqTsit5", "OrdinaryDiffEqVerner", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "Static", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"] -git-tree-sha1 = "cd892f12371c287dc50d6ad3af075b088b6f2d48" +git-tree-sha1 = "798f5e1a1f8b5a1bbba1e6134b77a77ccc509678" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" -version = "6.89.0" +version = "6.92.0" [[deps.OrdinaryDiffEqAdamsBashforthMoulton]] -deps = ["ADTypes", "DiffEqBase", "FastBroadcast", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqLowOrderRK", "Polyester", "RecursiveArrayTools", "Reexport", "Static"] -git-tree-sha1 = "8e3c5978d0531a961f70d2f2730d1d16ed3bbd12" +deps = ["DiffEqBase", "FastBroadcast", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqLowOrderRK", "Polyester", "RecursiveArrayTools", "Reexport", "Static"] +git-tree-sha1 = "82f78099ecf4e0fa53545811318520d87e7fe0b8" uuid = "89bda076-bce5-4f1c-845f-551c83cdda9a" -version = "1.1.0" +version = "1.2.0" [[deps.OrdinaryDiffEqBDF]] -deps = ["ArrayInterface", "DiffEqBase", "FastBroadcast", "LinearAlgebra", "MacroTools", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqNonlinearSolve", "OrdinaryDiffEqSDIRK", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "StaticArrays", "TruncatedStacktraces"] -git-tree-sha1 = "b4498d40bf35da0b6d22652ff2e9d8820590b3c6" +deps = ["ADTypes", "ArrayInterface", "DiffEqBase", "FastBroadcast", "LinearAlgebra", "MacroTools", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqNonlinearSolve", "OrdinaryDiffEqSDIRK", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "StaticArrays", "TruncatedStacktraces"] +git-tree-sha1 = "970ac761ae1c4249fc70d75760c328269a518585" uuid = "6ad6398a-0878-4a85-9266-38940aa047c8" -version = "1.1.2" +version = "1.3.0" [[deps.OrdinaryDiffEqCore]] -deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "EnumX", "FastBroadcast", "FastClosures", "FillArrays", "FunctionWrappersWrappers", "InteractiveUtils", "LinearAlgebra", "Logging", "MacroTools", "MuladdMacro", "Polyester", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "SimpleUnPack", "Static", "StaticArrayInterface", "StaticArraysCore", "TruncatedStacktraces"] -git-tree-sha1 = "5595eb94d0dd3cde2f5cf456394a1e0a61237e95" +deps = ["ADTypes", "Accessors", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "EnumX", "FastBroadcast", "FastClosures", "FastPower", "FillArrays", "FunctionWrappersWrappers", "InteractiveUtils", "LinearAlgebra", "Logging", "MacroTools", "MuladdMacro", "Polyester", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "SimpleUnPack", "Static", "StaticArrayInterface", "StaticArraysCore", "SymbolicIndexingInterface", "TruncatedStacktraces"] +git-tree-sha1 = "f47451c0ca3a2b0f11e966ed7731f2bd17d9b0e3" uuid = "bbf590c4-e513-4bbe-9b18-05decba2e5d8" -version = "1.6.0" +version = "1.19.0" weakdeps = ["EnzymeCore"] [deps.OrdinaryDiffEqCore.extensions] OrdinaryDiffEqCoreEnzymeCoreExt = "EnzymeCore" [[deps.OrdinaryDiffEqDefault]] -deps = ["DiffEqBase", "EnumX", "LinearAlgebra", "LinearSolve", "OrdinaryDiffEqBDF", "OrdinaryDiffEqCore", "OrdinaryDiffEqRosenbrock", "OrdinaryDiffEqTsit5", "OrdinaryDiffEqVerner", "PrecompileTools", "Preferences", "Reexport"] -git-tree-sha1 = "c8223e487d58bef28a3535b33ddf8ffdb44f46fb" +deps = ["ADTypes", "DiffEqBase", "EnumX", "LinearAlgebra", "LinearSolve", "OrdinaryDiffEqBDF", "OrdinaryDiffEqCore", "OrdinaryDiffEqRosenbrock", "OrdinaryDiffEqTsit5", "OrdinaryDiffEqVerner", "PrecompileTools", "Preferences", "Reexport"] +git-tree-sha1 = "835c06684b6ff1b8904ceae4d18cc8fe45b9a7cc" uuid = "50262376-6c5a-4cf5-baba-aaf4f84d72d7" -version = "1.1.0" +version = "1.3.0" [[deps.OrdinaryDiffEqDifferentiation]] deps = ["ADTypes", "ArrayInterface", "DiffEqBase", "FastBroadcast", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "LinearAlgebra", "LinearSolve", "OrdinaryDiffEqCore", "SciMLBase", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays"] -git-tree-sha1 = "e63ec633b1efa99e3caa2e26a01faaa88ba6cef9" +git-tree-sha1 = "9a535370247496c1375ba6d08b0493c0d856d25b" uuid = "4302a76b-040a-498a-8c04-15b101fed76b" -version = "1.1.0" +version = "1.4.0" [[deps.OrdinaryDiffEqExplicitRK]] deps = ["DiffEqBase", "FastBroadcast", "LinearAlgebra", "MuladdMacro", "OrdinaryDiffEqCore", "RecursiveArrayTools", "Reexport", "TruncatedStacktraces"] @@ -1751,22 +1906,22 @@ uuid = "9286f039-9fbf-40e8-bf65-aa933bdc4db0" version = "1.1.0" [[deps.OrdinaryDiffEqExponentialRK]] -deps = ["DiffEqBase", "ExponentialUtilities", "FastBroadcast", "LinearAlgebra", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqSDIRK", "OrdinaryDiffEqVerner", "RecursiveArrayTools", "Reexport", "SciMLBase"] -git-tree-sha1 = "f63938b8e9e5d3a05815defb3ebdbdcf61ec0a74" +deps = ["ADTypes", "DiffEqBase", "ExponentialUtilities", "FastBroadcast", "LinearAlgebra", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqSDIRK", "OrdinaryDiffEqVerner", "RecursiveArrayTools", "Reexport", "SciMLBase"] +git-tree-sha1 = "8d2ab84d7fabdfde995e5f567361f238069497f5" uuid = "e0540318-69ee-4070-8777-9e2de6de23de" -version = "1.1.0" +version = "1.4.0" [[deps.OrdinaryDiffEqExtrapolation]] -deps = ["DiffEqBase", "FastBroadcast", "LinearSolve", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "Polyester", "RecursiveArrayTools", "Reexport"] -git-tree-sha1 = "fea595528a160ed5cade9eee217a9691b1d97714" +deps = ["ADTypes", "DiffEqBase", "FastBroadcast", "FastPower", "LinearSolve", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "Polyester", "RecursiveArrayTools", "Reexport"] +git-tree-sha1 = "80a636aac325c546b04e3bf20f0c80eaa0173dd4" uuid = "becaefa8-8ca2-5cf9-886d-c06f3d2bd2c4" -version = "1.1.0" +version = "1.5.0" [[deps.OrdinaryDiffEqFIRK]] -deps = ["DiffEqBase", "FastBroadcast", "LinearAlgebra", "LinearSolve", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqNonlinearSolve", "RecursiveArrayTools", "Reexport", "SciMLOperators"] -git-tree-sha1 = "795221c662698851328cb7787965ab4a180d9468" +deps = ["ADTypes", "DiffEqBase", "FastBroadcast", "FastGaussQuadrature", "FastPower", "LinearAlgebra", "LinearSolve", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqNonlinearSolve", "Polyester", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators"] +git-tree-sha1 = "7dfc32df06db3d9d10128053c0e53deb213fb28d" uuid = "5960d6e9-dd7a-4743-88e7-cf307b64f125" -version = "1.1.1" +version = "1.8.0" [[deps.OrdinaryDiffEqFeagin]] deps = ["DiffEqBase", "FastBroadcast", "MuladdMacro", "OrdinaryDiffEqCore", "Polyester", "RecursiveArrayTools", "Reexport", "Static"] @@ -1787,10 +1942,10 @@ uuid = "d28bc4f8-55e1-4f49-af69-84c1a99f0f58" version = "1.1.0" [[deps.OrdinaryDiffEqIMEXMultistep]] -deps = ["DiffEqBase", "FastBroadcast", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqNonlinearSolve", "Reexport"] -git-tree-sha1 = "9f8f52aad2399d7714b400ff9d203254b0a89c4a" +deps = ["ADTypes", "DiffEqBase", "FastBroadcast", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqNonlinearSolve", "Reexport"] +git-tree-sha1 = "095bab73a3ff185e9ef971fc42ecc93c7824e589" uuid = "9f002381-b378-40b7-97a6-27a27c83f129" -version = "1.1.0" +version = "1.3.0" [[deps.OrdinaryDiffEqLinear]] deps = ["DiffEqBase", "ExponentialUtilities", "LinearAlgebra", "OrdinaryDiffEqCore", "OrdinaryDiffEqTsit5", "OrdinaryDiffEqVerner", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators"] @@ -1806,15 +1961,15 @@ version = "1.2.0" [[deps.OrdinaryDiffEqLowStorageRK]] deps = ["Adapt", "DiffEqBase", "FastBroadcast", "MuladdMacro", "OrdinaryDiffEqCore", "Polyester", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "Static", "StaticArrays"] -git-tree-sha1 = "590561f3af623d5485d070b4d7044f8854535f5a" +git-tree-sha1 = "52ec7081e65291fa5c19749312df0818db2fa1bc" uuid = "b0944070-b475-4768-8dec-fb6eb410534d" -version = "1.2.1" +version = "1.3.0" [[deps.OrdinaryDiffEqNonlinearSolve]] deps = ["ADTypes", "ArrayInterface", "DiffEqBase", "FastBroadcast", "FastClosures", "ForwardDiff", "LinearAlgebra", "LinearSolve", "MuladdMacro", "NonlinearSolve", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "PreallocationTools", "RecursiveArrayTools", "SciMLBase", "SciMLOperators", "SciMLStructures", "SimpleNonlinearSolve", "StaticArrays"] -git-tree-sha1 = "a2a4119f3e35f7982f78e17beea7b12485d179e9" +git-tree-sha1 = "1b89e3e84752a3cbd2c94db565e6ea7acb5279b2" uuid = "127b3ac7-2247-4354-8eb6-78cf4e7c58e8" -version = "1.2.1" +version = "1.5.0" [[deps.OrdinaryDiffEqNordsieck]] deps = ["DiffEqBase", "FastBroadcast", "LinearAlgebra", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqTsit5", "Polyester", "RecursiveArrayTools", "Reexport", "Static"] @@ -1823,10 +1978,10 @@ uuid = "c9986a66-5c92-4813-8696-a7ec84c806c8" version = "1.1.0" [[deps.OrdinaryDiffEqPDIRK]] -deps = ["DiffEqBase", "FastBroadcast", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqNonlinearSolve", "Polyester", "Reexport", "StaticArrays"] -git-tree-sha1 = "a8b7f8107c477e07c6a6c00d1d66cac68b801bbc" +deps = ["ADTypes", "DiffEqBase", "FastBroadcast", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqNonlinearSolve", "Polyester", "Reexport", "StaticArrays"] +git-tree-sha1 = "f74b27b8b811a83d77a9cad6293e793ab0804cdc" uuid = "5dd0a6cf-3d4b-4314-aa06-06d4e299bc89" -version = "1.1.0" +version = "1.3.0" [[deps.OrdinaryDiffEqPRK]] deps = ["DiffEqBase", "FastBroadcast", "MuladdMacro", "OrdinaryDiffEqCore", "Polyester", "Reexport"] @@ -1848,27 +2003,27 @@ version = "1.1.0" [[deps.OrdinaryDiffEqRosenbrock]] deps = ["ADTypes", "DiffEqBase", "FastBroadcast", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "MacroTools", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "Polyester", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "Static"] -git-tree-sha1 = "96b47cdd12cb4ce8f70d701b49f855271a462bd4" +git-tree-sha1 = "a0d1e65771e087a84c398f20ea5f189043869997" uuid = "43230ef6-c299-4910-a778-202eb28ce4ce" -version = "1.2.0" +version = "1.7.0" [[deps.OrdinaryDiffEqSDIRK]] -deps = ["DiffEqBase", "FastBroadcast", "LinearAlgebra", "MacroTools", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqNonlinearSolve", "RecursiveArrayTools", "Reexport", "SciMLBase", "TruncatedStacktraces"] -git-tree-sha1 = "f6683803a58de600ab7a26d2f49411c9923e9721" +deps = ["ADTypes", "DiffEqBase", "FastBroadcast", "LinearAlgebra", "MacroTools", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqNonlinearSolve", "RecursiveArrayTools", "Reexport", "SciMLBase", "TruncatedStacktraces"] +git-tree-sha1 = "b3a7e3a2f355d837c823b435630f035aef446b45" uuid = "2d112036-d095-4a1e-ab9a-08536f3ecdbf" -version = "1.1.0" +version = "1.3.0" [[deps.OrdinaryDiffEqSSPRK]] deps = ["DiffEqBase", "FastBroadcast", "MuladdMacro", "OrdinaryDiffEqCore", "Polyester", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "Static", "StaticArrays"] -git-tree-sha1 = "7dbe4ac56f930df5e9abd003cedb54e25cbbea86" +git-tree-sha1 = "b97b9691437063ae7d9b1ef130e8b0d81415116f" uuid = "669c94d9-1f4b-4b64-b377-1aa079aa2388" -version = "1.2.0" +version = "1.2.1" [[deps.OrdinaryDiffEqStabilizedIRK]] -deps = ["DiffEqBase", "FastBroadcast", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqNonlinearSolve", "RecursiveArrayTools", "Reexport", "StaticArrays"] -git-tree-sha1 = "348fd6def9a88518715425025eadd58517017325" +deps = ["ADTypes", "DiffEqBase", "FastBroadcast", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqNonlinearSolve", "RecursiveArrayTools", "Reexport", "StaticArrays"] +git-tree-sha1 = "111c23b68ad644b47e38242af920d5805c7bedb1" uuid = "e3e12d00-db14-5390-b879-ac3dd2ef6296" -version = "1.1.0" +version = "1.3.0" [[deps.OrdinaryDiffEqStabilizedRK]] deps = ["DiffEqBase", "FastBroadcast", "MuladdMacro", "OrdinaryDiffEqCore", "RecursiveArrayTools", "Reexport", "StaticArrays"] @@ -1878,9 +2033,9 @@ version = "1.1.0" [[deps.OrdinaryDiffEqSymplecticRK]] deps = ["DiffEqBase", "FastBroadcast", "MuladdMacro", "OrdinaryDiffEqCore", "Polyester", "RecursiveArrayTools", "Reexport"] -git-tree-sha1 = "4e8b8c8b81df3df17e2eb4603115db3b30a88235" +git-tree-sha1 = "a13d59a2d6cfb6a3332a7782638ca6e1cb6ca688" uuid = "fa646aed-7ef9-47eb-84c4-9443fc8cbfa8" -version = "1.1.0" +version = "1.3.0" [[deps.OrdinaryDiffEqTsit5]] deps = ["DiffEqBase", "FastBroadcast", "LinearAlgebra", "MuladdMacro", "OrdinaryDiffEqCore", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "Static", "TruncatedStacktraces"] @@ -1901,15 +2056,15 @@ version = "10.42.0+1" [[deps.PDEBase]] deps = ["DomainSets", "ModelingToolkit", "SciMLBase", "SymbolicUtils", "Symbolics"] -git-tree-sha1 = "18706bb94c9938703db6236a023b883c180650ae" +git-tree-sha1 = "467fa575f9c268d00f663ca63589757dd983195f" uuid = "a7812802-0625-4b9e-961c-d332478797e5" -version = "0.1.14" +version = "0.1.17" [[deps.PDMats]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "949347156c25054de2db3b166c52ac4728cbad65" +git-tree-sha1 = "966b85253e959ea89c53a9abebbf2e964fbf593b" uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" -version = "0.11.31" +version = "0.11.32" [[deps.PackageExtensionCompat]] git-tree-sha1 = "fb28e33b8a95c4cee25ce296c817d89cc2e53518" @@ -1919,15 +2074,15 @@ weakdeps = ["Requires", "TOML"] [[deps.Pango_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "FriBidi_jll", "Glib_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl"] -git-tree-sha1 = "e127b609fb9ecba6f201ba7ab753d5a605d53801" +git-tree-sha1 = "3b31172c032a1def20c98dae3f2cdc9d10e3b561" uuid = "36c8627f-9965-5494-a995-c6b170f724f3" -version = "1.54.1+0" +version = "1.56.1+0" [[deps.ParameterizedFunctions]] deps = ["DataStructures", "DiffEqBase", "DocStringExtensions", "Latexify", "LinearAlgebra", "ModelingToolkit", "Reexport", "SciMLBase"] -git-tree-sha1 = "8556de70ac4a180805f85a2f5c2274061de67586" +git-tree-sha1 = "857b4339879b538e0d63344098ef859552126ca8" uuid = "65888b18-ceab-5e60-b2b9-181511a3b968" -version = "5.17.0" +version = "5.17.2" [[deps.Parameters]] deps = ["OrderedCollections", "UnPack"] @@ -1948,32 +2103,36 @@ version = "1.3.0" [[deps.Pixman_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LLVMOpenMP_jll", "Libdl"] -git-tree-sha1 = "35621f10a7531bc8fa58f74610b1bfb70a3cfc6b" +git-tree-sha1 = "db76b1ecd5e9715f3d043cec13b2ec93ce015d53" uuid = "30392449-352a-5448-841d-b1acce4e97dc" -version = "0.43.4+0" +version = "0.44.2+0" [[deps.Pkg]] -deps = ["Artifacts", "Dates", "Downloads", "FileWatching", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"] +deps = ["Artifacts", "Dates", "Downloads", "FileWatching", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "Random", "SHA", "TOML", "Tar", "UUIDs", "p7zip_jll"] uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f" -version = "1.10.0" +version = "1.11.0" +weakdeps = ["REPL"] + + [deps.Pkg.extensions] + REPLExt = "REPL" [[deps.PlotThemes]] deps = ["PlotUtils", "Statistics"] -git-tree-sha1 = "6e55c6841ce3411ccb3457ee52fc48cb698d6fb0" +git-tree-sha1 = "41031ef3a1be6f5bbbf3e8073f210556daeae5ca" uuid = "ccf2f8ad-2431-5c83-bf29-c5338b663b6a" -version = "3.2.0" +version = "3.3.0" [[deps.PlotUtils]] -deps = ["ColorSchemes", "Colors", "Dates", "PrecompileTools", "Printf", "Random", "Reexport", "Statistics"] -git-tree-sha1 = "7b1a9df27f072ac4c9c7cbe5efb198489258d1f5" +deps = ["ColorSchemes", "Colors", "Dates", "PrecompileTools", "Printf", "Random", "Reexport", "StableRNGs", "Statistics"] +git-tree-sha1 = "3ca9a356cd2e113c420f2c13bea19f8d3fb1cb18" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.4.1" +version = "1.4.3" [[deps.Plots]] deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "TOML", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] -git-tree-sha1 = "45470145863035bb124ca51b320ed35d071cc6c2" +git-tree-sha1 = "24be21541580495368c35a6ccef1454e7b5015be" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.40.8" +version = "1.40.11" [deps.Plots.extensions] FileIOExt = "FileIO" @@ -2031,15 +2190,17 @@ version = "0.2.4" [[deps.PreallocationTools]] deps = ["Adapt", "ArrayInterface", "ForwardDiff"] -git-tree-sha1 = "6c62ce45f268f3f958821a1e5192cf91c75ae89c" +git-tree-sha1 = "8765738bc5a6f1554cb61c5ddfae5bf279e8b110" uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46" -version = "0.4.24" +version = "0.4.25" [deps.PreallocationTools.extensions] PreallocationToolsReverseDiffExt = "ReverseDiff" + PreallocationToolsSparseConnectivityTracerExt = "SparseConnectivityTracer" [deps.PreallocationTools.weakdeps] ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" + SparseConnectivityTracer = "9f842d2f-2579-4b1d-911e-f412cf18a3f5" [[deps.PrecompileTools]] deps = ["Preferences"] @@ -2055,17 +2216,24 @@ version = "1.4.3" [[deps.PrettyTables]] deps = ["Crayons", "LaTeXStrings", "Markdown", "PrecompileTools", "Printf", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "66b20dd35966a748321d3b2537c4584cf40387c7" +git-tree-sha1 = "1101cd475833706e4d0e7b122218257178f48f34" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.3.2" +version = "2.4.0" + +[[deps.Primes]] +deps = ["IntegerMathUtils"] +git-tree-sha1 = "25cdd1d20cd005b52fc12cb6be3f75faaf59bb9b" +uuid = "27ebfcd6-29c5-5fa9-bf4b-fb8fc14df3ae" +version = "0.5.7" [[deps.Printf]] deps = ["Unicode"] uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7" +version = "1.11.0" [[deps.Profile]] -deps = ["Printf"] uuid = "9abbd945-dff8-562f-b5e8-e1ebf5ef1b79" +version = "1.11.0" [[deps.ProfileSVG]] deps = ["Colors", "FlameGraphs", "Profile", "UUIDs"] @@ -2080,9 +2248,9 @@ uuid = "92933f4c-e287-5a05-a399-4b506db050ca" version = "1.10.2" [[deps.PtrArrays]] -git-tree-sha1 = "77a42d78b6a92df47ab37e177b2deac405e1c88f" +git-tree-sha1 = "1d36ef11a9aaf1e8b74dacc6a731dd1de8fd493d" uuid = "43287f4e-b6f4-7ad1-bb20-aadabca52c3d" -version = "1.2.1" +version = "1.3.0" [[deps.Qt6Base_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Fontconfig_jll", "Glib_jll", "JLLWrappers", "Libdl", "Libglvnd_jll", "OpenSSL_jll", "Vulkan_Loader_jll", "Xorg_libSM_jll", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Xorg_libxcb_jll", "Xorg_xcb_util_cursor_jll", "Xorg_xcb_util_image_jll", "Xorg_xcb_util_keysyms_jll", "Xorg_xcb_util_renderutil_jll", "Xorg_xcb_util_wm_jll", "Zlib_jll", "libinput_jll", "xkbcommon_jll"] @@ -2110,9 +2278,9 @@ version = "6.7.1+1" [[deps.QuadGK]] deps = ["DataStructures", "LinearAlgebra"] -git-tree-sha1 = "1d587203cf851a51bf1ea31ad7ff89eff8d625ea" +git-tree-sha1 = "9da16da70037ba9d701192e27befedefb91ec284" uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc" -version = "2.11.0" +version = "2.11.2" [deps.QuadGK.extensions] QuadGKEnzymeExt = "Enzyme" @@ -2128,21 +2296,23 @@ version = "0.1.6" [[deps.QuasiArrays]] deps = ["ArrayLayouts", "DomainSets", "FillArrays", "LazyArrays", "LinearAlgebra", "StaticArrays"] -git-tree-sha1 = "d280721281fe34cc2e89c4240a5bc779af969154" +git-tree-sha1 = "2f063d651e23c3e5029d439e136bfa298475ec39" uuid = "c4ea9172-b204-11e9-377d-29865faadc5c" -version = "0.11.7" +version = "0.12.0" weakdeps = ["SparseArrays"] [deps.QuasiArrays.extensions] QuasiArraysSparseArraysExt = "SparseArrays" [[deps.REPL]] -deps = ["InteractiveUtils", "Markdown", "Sockets", "Unicode"] +deps = ["InteractiveUtils", "Markdown", "Sockets", "StyledStrings", "Unicode"] uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb" +version = "1.11.0" [[deps.Random]] deps = ["SHA"] uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c" +version = "1.11.0" [[deps.Random123]] deps = ["Random", "RandomNumbers"] @@ -2178,11 +2348,22 @@ git-tree-sha1 = "45cf9fd0ca5839d06ef333c8201714e888486342" uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" version = "0.6.12" +[[deps.RecurrenceRelationships]] +git-tree-sha1 = "aa0b5958764e974a6e8d52f5b2daf51b26ede1a2" +uuid = "807425ed-42ea-44d6-a357-6771516d7b2c" +version = "0.2.0" +weakdeps = ["FillArrays", "LazyArrays", "LinearAlgebra"] + + [deps.RecurrenceRelationships.extensions] + RecurrenceRelationshipsFillArraysExt = "FillArrays" + RecurrenceRelationshipsLazyArraysExt = "LazyArrays" + RecurrenceRelationshipsLinearAlgebraExt = "LinearAlgebra" + [[deps.RecursiveArrayTools]] deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] -git-tree-sha1 = "b034171b93aebc81b3e1890a036d13a9c4a9e3e0" +git-tree-sha1 = "35ac79a85c8086892258581d8b6df9cd8db5c91a" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "3.27.0" +version = "3.31.1" [deps.RecursiveArrayTools.extensions] RecursiveArrayToolsFastBroadcastExt = "FastBroadcast" @@ -2191,6 +2372,7 @@ version = "3.27.0" RecursiveArrayToolsMonteCarloMeasurementsExt = "MonteCarloMeasurements" RecursiveArrayToolsReverseDiffExt = ["ReverseDiff", "Zygote"] RecursiveArrayToolsSparseArraysExt = ["SparseArrays"] + RecursiveArrayToolsStructArraysExt = "StructArrays" RecursiveArrayToolsTrackerExt = "Tracker" RecursiveArrayToolsZygoteExt = "Zygote" @@ -2201,6 +2383,7 @@ version = "3.27.0" MonteCarloMeasurements = "0987c9cc-fe09-11e8-30f0-b96dd679fdca" ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" + StructArrays = "09ab397b-f2b6-538f-b94a-2f83cf4a842a" Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" @@ -2223,9 +2406,9 @@ version = "1.0.1" [[deps.Requires]] deps = ["UUIDs"] -git-tree-sha1 = "838a3a4188e2ded87a4f9f184b4b0d78a1e91cb7" +git-tree-sha1 = "62389eeff14780bfe55195b7204c0d8738436d64" uuid = "ae029012-a4dd-5104-9daa-d747884805df" -version = "1.3.0" +version = "1.3.1" [[deps.ResettableStacks]] deps = ["StaticArrays"] @@ -2235,15 +2418,15 @@ version = "1.1.1" [[deps.Rmath]] deps = ["Random", "Rmath_jll"] -git-tree-sha1 = "f65dcb5fa46aee0cf9ed6274ccbd597adc49aa7b" +git-tree-sha1 = "852bd0f55565a9e973fcfee83a84413270224dc4" uuid = "79098fc4-a85e-5d69-aa6a-4863f24498fa" -version = "0.7.1" +version = "0.8.0" [[deps.Rmath_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "e60724fd3beea548353984dc61c943ecddb0e29a" +git-tree-sha1 = "58cdd8fb2201a6267e1db87ff148dd6c1dbd8ad8" uuid = "f50d1b31-88e8-58de-be2c-1cc44531875f" -version = "0.4.3+0" +version = "0.5.1+0" [[deps.RootedTrees]] deps = ["LaTeXStrings", "Latexify", "LinearAlgebra", "Preferences", "RecipesBase", "Requires"] @@ -2267,6 +2450,12 @@ git-tree-sha1 = "04c968137612c4a5629fa531334bb81ad5680f00" uuid = "7e49a35a-f44a-4d26-94aa-eba1b4ca6b47" version = "0.5.13" +[[deps.SCCNonlinearSolve]] +deps = ["CommonSolve", "PrecompileTools", "Reexport", "SciMLBase", "SymbolicIndexingInterface"] +git-tree-sha1 = "0caf35e2204c9045ca203b147b5dac4fa8e1cf20" +uuid = "9dfe8606-65a1-4bb3-9748-cb89d1561431" +version = "1.0.0" + [[deps.SHA]] uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" version = "0.7.0" @@ -2283,23 +2472,25 @@ uuid = "476501e8-09a2-5ece-8869-fb82de89a1fa" version = "0.6.43" [[deps.SciMLBase]] -deps = ["ADTypes", "Accessors", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "Expronicon", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] -git-tree-sha1 = "952e09c65264fe2a8155dd6aad60c188a0b83f69" +deps = ["ADTypes", "Accessors", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Moshi", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface"] +git-tree-sha1 = "796073854427ce00c1cb454911bf52b76523c44c" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "2.53.0" +version = "2.77.1" [deps.SciMLBase.extensions] SciMLBaseChainRulesCoreExt = "ChainRulesCore" + SciMLBaseMLStyleExt = "MLStyle" SciMLBaseMakieExt = "Makie" SciMLBasePartialFunctionsExt = "PartialFunctions" SciMLBasePyCallExt = "PyCall" SciMLBasePythonCallExt = "PythonCall" SciMLBaseRCallExt = "RCall" - SciMLBaseZygoteExt = "Zygote" + SciMLBaseZygoteExt = ["Zygote", "ChainRulesCore"] [deps.SciMLBase.weakdeps] ChainRules = "082447d4-558c-5d27-93f4-14fc19e9eca2" ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" + MLStyle = "d8e11817-5142-5d16-987a-aa16d5891078" Makie = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a" PartialFunctions = "570af359-4316-4cb7-8c74-252c00c2016b" PyCall = "438e738f-606a-5dbb-bf0a-cddfbfd45ab0" @@ -2313,11 +2504,17 @@ git-tree-sha1 = "f4076dd5a103010d48bb6c4e50c5526f6622fa96" uuid = "31c91b34-3c75-11e9-0341-95557aab0344" version = "0.1.3" +[[deps.SciMLJacobianOperators]] +deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "ConstructionBase", "DifferentiationInterface", "FastClosures", "LinearAlgebra", "SciMLBase", "SciMLOperators"] +git-tree-sha1 = "f66048bb969e67bd7d1bdd03cd0b81219642bbd0" +uuid = "19f34311-ddf3-4b8b-af20-060888a46c0e" +version = "0.1.1" + [[deps.SciMLOperators]] deps = ["Accessors", "ArrayInterface", "DocStringExtensions", "LinearAlgebra", "MacroTools"] -git-tree-sha1 = "e39c5f217f9aca640c8e27ab21acf557a3967db5" +git-tree-sha1 = "6149620767866d4b0f0f7028639b6e661b6a1e44" uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961" -version = "0.3.10" +version = "0.3.12" weakdeps = ["SparseArrays", "StaticArraysCore"] [deps.SciMLOperators.extensions] @@ -2326,9 +2523,9 @@ weakdeps = ["SparseArrays", "StaticArraysCore"] [[deps.SciMLStructures]] deps = ["ArrayInterface"] -git-tree-sha1 = "25514a6f200219cd1073e4ff23a6324e4a7efe64" +git-tree-sha1 = "566c4ed301ccb2a44cbd5a27da5f885e0ed1d5df" uuid = "53ae85a6-f571-4167-b2af-e1d143709226" -version = "1.5.0" +version = "1.7.0" [[deps.Scratch]] deps = ["Dates"] @@ -2338,16 +2535,18 @@ version = "1.2.1" [[deps.Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" +version = "1.11.0" [[deps.Setfield]] deps = ["ConstructionBase", "Future", "MacroTools", "StaticArraysCore"] -git-tree-sha1 = "e2cc6d8c88613c05e1defb55170bf5ff211fbeac" +git-tree-sha1 = "c5391c6ace3bc430ca630251d02ea9687169ca68" uuid = "efcf1570-3423-57d1-acb7-fd33fddbac46" -version = "1.1.1" +version = "1.1.2" [[deps.SharedArrays]] deps = ["Distributed", "Mmap", "Random", "Serialization"] uuid = "1a1011a3-84de-559e-8e89-a11a2f7dc383" +version = "1.11.0" [[deps.Showoff]] deps = ["Dates", "Grisu"] @@ -2356,27 +2555,27 @@ uuid = "992d4aef-0814-514b-bc4d-f2e9a6c4116f" version = "1.0.3" [[deps.SimpleBufferStream]] -git-tree-sha1 = "874e8867b33a00e784c8a7e4b60afe9e037b74e1" +git-tree-sha1 = "f305871d2f381d21527c770d4788c06c097c9bc1" uuid = "777ac1f9-54b0-4bf8-805c-2214025038e7" -version = "1.1.0" +version = "1.2.0" [[deps.SimpleNonlinearSolve]] -deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "DiffResults", "DifferentiationInterface", "FastClosures", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "MaybeInplace", "PrecompileTools", "Reexport", "SciMLBase", "Setfield", "StaticArraysCore"] -git-tree-sha1 = "4d7a7c177bcb4c6dc465f09db91bfdb28c578919" +deps = ["ADTypes", "ArrayInterface", "BracketingNonlinearSolve", "CommonSolve", "ConcreteStructs", "DifferentiationInterface", "FastClosures", "FiniteDiff", "ForwardDiff", "LineSearch", "LinearAlgebra", "MaybeInplace", "NonlinearSolveBase", "PrecompileTools", "Reexport", "SciMLBase", "Setfield", "StaticArraysCore"] +git-tree-sha1 = "f42f8b8b728812e485ad099ee5e959d9b49cdb3d" uuid = "727e6d20-b764-4bd8-a329-72de5adea6c7" -version = "1.12.0" +version = "2.2.0" [deps.SimpleNonlinearSolve.extensions] SimpleNonlinearSolveChainRulesCoreExt = "ChainRulesCore" + SimpleNonlinearSolveDiffEqBaseExt = "DiffEqBase" SimpleNonlinearSolveReverseDiffExt = "ReverseDiff" SimpleNonlinearSolveTrackerExt = "Tracker" - SimpleNonlinearSolveZygoteExt = "Zygote" [deps.SimpleNonlinearSolve.weakdeps] ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" + DiffEqBase = "2b5f629d-d688-5b77-993f-72d75c75574e" ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" - Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" [[deps.SimpleSolvers]] deps = ["Distances", "ForwardDiff", "LineSearches", "LinearAlgebra", "NLsolve", "Printf"] @@ -2397,6 +2596,7 @@ version = "1.1.0" [[deps.Sockets]] uuid = "6462fe0b-24de-5631-8697-dd941f90decc" +version = "1.11.0" [[deps.SoftGlobalScope]] deps = ["REPL"] @@ -2413,13 +2613,13 @@ version = "1.2.1" [[deps.SparseArrays]] deps = ["Libdl", "LinearAlgebra", "Random", "Serialization", "SuiteSparse_jll"] uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" -version = "1.10.0" +version = "1.11.0" [[deps.SparseDiffTools]] -deps = ["ADTypes", "Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "PackageExtensionCompat", "Random", "Reexport", "SciMLOperators", "Setfield", "SparseArrays", "StaticArrayInterface", "StaticArrays", "Tricks", "UnPack", "VertexSafeGraphs"] -git-tree-sha1 = "c9e5d7ee75cf6a1ca3a22c9a6a4ef451792cf62b" +deps = ["ADTypes", "Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "PackageExtensionCompat", "Random", "Reexport", "SciMLOperators", "Setfield", "SparseArrays", "StaticArrayInterface", "StaticArrays", "UnPack", "VertexSafeGraphs"] +git-tree-sha1 = "59bad850b1fc622051bf80a2be86c95b487e0243" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" -version = "2.20.0" +version = "2.24.0" [deps.SparseDiffTools.extensions] SparseDiffToolsEnzymeExt = "Enzyme" @@ -2436,32 +2636,36 @@ version = "2.20.0" Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" [[deps.SparseMatrixColorings]] -deps = ["ADTypes", "Compat", "DataStructures", "DocStringExtensions", "LinearAlgebra", "Random", "SparseArrays"] -git-tree-sha1 = "996dff77d814c45c3f2342fa0113e4ad31e712e8" +deps = ["ADTypes", "DataStructures", "DocStringExtensions", "LinearAlgebra", "Random", "SparseArrays"] +git-tree-sha1 = "e0ae9189392572abe85bc9fd4ce35e772b1e1e10" uuid = "0a514795-09f3-496d-8182-132a7b665d35" -version = "0.4.0" +version = "0.4.14" +weakdeps = ["Colors"] -[[deps.Sparspak]] -deps = ["Libdl", "LinearAlgebra", "Logging", "OffsetArrays", "Printf", "SparseArrays", "Test"] -git-tree-sha1 = "342cf4b449c299d8d1ceaf00b7a49f4fbc7940e7" -uuid = "e56a9233-b9d6-4f03-8d0f-1825330902ac" -version = "0.3.9" + [deps.SparseMatrixColorings.extensions] + SparseMatrixColoringsColorsExt = "Colors" [[deps.SpecialFunctions]] deps = ["IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"] -git-tree-sha1 = "2f5d4697f21388cbe1ff299430dd169ef97d7e14" +git-tree-sha1 = "64cca0c26b4f31ba18f13f6c12af7c85f478cfde" uuid = "276daf66-3868-5448-9aa4-cd146d93841b" -version = "2.4.0" +version = "2.5.0" weakdeps = ["ChainRulesCore"] [deps.SpecialFunctions.extensions] SpecialFunctionsChainRulesCoreExt = "ChainRulesCore" +[[deps.StableRNGs]] +deps = ["Random"] +git-tree-sha1 = "83e6cce8324d49dfaf9ef059227f91ed4441a8e5" +uuid = "860ef19b-820b-49d6-a774-d7a799459cd3" +version = "1.0.2" + [[deps.Static]] deps = ["CommonWorldInvalidations", "IfElse", "PrecompileTools"] -git-tree-sha1 = "87d51a3ee9a4b0d2fe054bdd3fc2436258db2603" +git-tree-sha1 = "f737d444cb0ad07e61b3c1bef8eb91203c321eff" uuid = "aedffcd0-7271-4cad-89d0-dc628f76c6d3" -version = "1.1.1" +version = "1.2.0" [[deps.StaticArrayInterface]] deps = ["ArrayInterface", "Compat", "IfElse", "LinearAlgebra", "PrecompileTools", "Static"] @@ -2476,9 +2680,9 @@ weakdeps = ["OffsetArrays", "StaticArrays"] [[deps.StaticArrays]] deps = ["LinearAlgebra", "PrecompileTools", "Random", "StaticArraysCore"] -git-tree-sha1 = "eeafab08ae20c62c44c8399ccb9354a04b80db50" +git-tree-sha1 = "0feb6b9031bd5c51f9072393eb5ab3efd31bf9e4" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.9.7" +version = "1.9.13" weakdeps = ["ChainRulesCore", "Statistics"] [deps.StaticArrays.extensions] @@ -2491,9 +2695,14 @@ uuid = "1e83bf80-4336-4d27-bf5d-d5a4f845583c" version = "1.4.3" [[deps.Statistics]] -deps = ["LinearAlgebra", "SparseArrays"] +deps = ["LinearAlgebra"] +git-tree-sha1 = "ae3bb1eb3bba077cd276bc5cfc337cc65c3075c0" uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" -version = "1.10.0" +version = "1.11.1" +weakdeps = ["SparseArrays"] + + [deps.Statistics.extensions] + SparseArraysExt = ["SparseArrays"] [[deps.StatsAPI]] deps = ["LinearAlgebra"] @@ -2502,16 +2711,16 @@ uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" version = "1.7.0" [[deps.StatsBase]] -deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] -git-tree-sha1 = "5cf7606d6cef84b543b483848d4ae08ad9832b21" +deps = ["AliasTables", "DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] +git-tree-sha1 = "29321314c920c26684834965ec2ce0dacc9cf8e5" uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" -version = "0.34.3" +version = "0.34.4" [[deps.StatsFuns]] deps = ["HypergeometricFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"] -git-tree-sha1 = "cef0472124fab0695b58ca35a77c6fb942fdab8a" +git-tree-sha1 = "b423576adc27097764a90e163157bcfc9acf0f46" uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" -version = "1.3.1" +version = "1.3.2" weakdeps = ["ChainRulesCore", "InverseFunctions"] [deps.StatsFuns.extensions] @@ -2532,23 +2741,35 @@ version = "0.3.7" [[deps.StringManipulation]] deps = ["PrecompileTools"] -git-tree-sha1 = "a04cabe79c5f01f4d723cc6704070ada0b9d46d5" +git-tree-sha1 = "725421ae8e530ec29bcbdddbe91ff8053421d023" uuid = "892a3eda-7b42-436c-8928-eab12a02cf0e" -version = "0.3.4" +version = "0.4.1" [[deps.StructArrays]] deps = ["ConstructionBase", "DataAPI", "Tables"] -git-tree-sha1 = "f4dc295e983502292c4c3f951dbb4e985e35b3be" +git-tree-sha1 = "5a3a31c41e15a1e042d60f2f4942adccba05d3c9" uuid = "09ab397b-f2b6-538f-b94a-2f83cf4a842a" -version = "0.6.18" -weakdeps = ["Adapt", "GPUArraysCore", "SparseArrays", "StaticArrays"] +version = "0.7.0" [deps.StructArrays.extensions] StructArraysAdaptExt = "Adapt" - StructArraysGPUArraysCoreExt = "GPUArraysCore" + StructArraysGPUArraysCoreExt = ["GPUArraysCore", "KernelAbstractions"] + StructArraysLinearAlgebraExt = "LinearAlgebra" StructArraysSparseArraysExt = "SparseArrays" StructArraysStaticArraysExt = "StaticArrays" + [deps.StructArrays.weakdeps] + Adapt = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" + GPUArraysCore = "46192b85-c4d5-4398-a991-12ede77f4527" + KernelAbstractions = "63c18a36-062a-441e-b654-da1e3ab1ce7c" + LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" + SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" + StaticArrays = "90137ffa-7385-5640-81b9-e52037218182" + +[[deps.StyledStrings]] +uuid = "f489334b-da3d-4c2e-b8f0-e476e12c162b" +version = "1.11.0" + [[deps.SuiteSparse]] deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"] uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9" @@ -2556,53 +2777,65 @@ uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9" [[deps.SuiteSparse_jll]] deps = ["Artifacts", "Libdl", "libblastrampoline_jll"] uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c" -version = "7.2.1+1" +version = "7.7.0+0" [[deps.Sundials]] deps = ["CEnum", "DataStructures", "DiffEqBase", "Libdl", "LinearAlgebra", "Logging", "PrecompileTools", "Reexport", "SciMLBase", "SparseArrays", "Sundials_jll"] -git-tree-sha1 = "82304990120934137261aa085e0d05a412fe0825" +git-tree-sha1 = "c135b599cec3558be36eaf86ab1ce7e259ef9534" uuid = "c3572dad-4567-51f8-b174-8c6c989267f4" -version = "4.25.0" +version = "4.27.0" [[deps.Sundials_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "SuiteSparse_jll", "libblastrampoline_jll"] -git-tree-sha1 = "ba4d38faeb62de7ef47155ed321dce40a549c305" +git-tree-sha1 = "91db7ed92c66f81435fe880947171f1212936b14" uuid = "fb77eaff-e24c-56d4-86b1-d163f2edb164" -version = "5.2.2+0" +version = "5.2.3+0" [[deps.SymbolicIndexingInterface]] deps = ["Accessors", "ArrayInterface", "RuntimeGeneratedFunctions", "StaticArraysCore"] -git-tree-sha1 = "988e04b34a4c3b824fb656f542473df99a4f610d" +git-tree-sha1 = "d6c04e26aa1c8f7d144e1a8c47f1c73d3013e289" uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5" -version = "0.3.30" +version = "0.3.38" [[deps.SymbolicLimits]] deps = ["SymbolicUtils"] -git-tree-sha1 = "fb099adbd7504f1e68b4512828e9d94197a8b889" +git-tree-sha1 = "fabf4650afe966a2ba646cabd924c3fd43577fc3" uuid = "19f23fe9-fdab-4a78-91af-e7b7767979c3" -version = "0.2.1" +version = "0.2.2" [[deps.SymbolicUtils]] -deps = ["AbstractTrees", "Bijections", "ChainRulesCore", "Combinatorics", "ConstructionBase", "DataStructures", "DocStringExtensions", "DynamicPolynomials", "IfElse", "LabelledArrays", "LinearAlgebra", "MultivariatePolynomials", "NaNMath", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicIndexingInterface", "TermInterface", "TimerOutputs", "Unityper"] -git-tree-sha1 = "a7ecd8fb3ee77a47ac033395069117763469c49e" +deps = ["AbstractTrees", "ArrayInterface", "Bijections", "ChainRulesCore", "Combinatorics", "ConstructionBase", "DataStructures", "DocStringExtensions", "DynamicPolynomials", "ExproniconLite", "LinearAlgebra", "MultivariatePolynomials", "NaNMath", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicIndexingInterface", "TaskLocalValues", "TermInterface", "TimerOutputs", "Unityper"] +git-tree-sha1 = "05f1e79aaa4830474cf05c5e6c088020a1d4ccfc" uuid = "d1185830-fcd6-423d-90d6-eec64667417b" -version = "2.1.3" +version = "3.21.0" + + [deps.SymbolicUtils.extensions] + SymbolicUtilsLabelledArraysExt = "LabelledArrays" + SymbolicUtilsReverseDiffExt = "ReverseDiff" + + [deps.SymbolicUtils.weakdeps] + LabelledArrays = "2ee39098-c373-598a-b85f-a56591580800" + ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" [[deps.Symbolics]] -deps = ["ADTypes", "ArrayInterface", "Bijections", "CommonWorldInvalidations", "ConstructionBase", "DataStructures", "DiffRules", "Distributions", "DocStringExtensions", "DomainSets", "DynamicPolynomials", "ForwardDiff", "IfElse", "LaTeXStrings", "LambertW", "Latexify", "Libdl", "LinearAlgebra", "LogExpFunctions", "MacroTools", "Markdown", "NaNMath", "PrecompileTools", "RecipesBase", "Reexport", "RuntimeGeneratedFunctions", "SciMLBase", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArraysCore", "SymbolicIndexingInterface", "SymbolicLimits", "SymbolicUtils", "TermInterface"] -git-tree-sha1 = "b13a5417865e9934d043718f644e4a67519463ce" +deps = ["ADTypes", "ArrayInterface", "Bijections", "CommonWorldInvalidations", "ConstructionBase", "DataStructures", "DiffRules", "Distributions", "DocStringExtensions", "DomainSets", "DynamicPolynomials", "LaTeXStrings", "Latexify", "Libdl", "LinearAlgebra", "LogExpFunctions", "MacroTools", "Markdown", "NaNMath", "OffsetArrays", "PrecompileTools", "Primes", "RecipesBase", "Reexport", "RuntimeGeneratedFunctions", "SciMLBase", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArraysCore", "SymbolicIndexingInterface", "SymbolicLimits", "SymbolicUtils", "TermInterface"] +git-tree-sha1 = "e7ef0402f159f982dad1d26bd7d9c9353d394f1d" uuid = "0c5d862f-8b57-4792-8d23-62f2024744c7" -version = "5.36.0" +version = "6.31.1" [deps.Symbolics.extensions] + SymbolicsForwardDiffExt = "ForwardDiff" SymbolicsGroebnerExt = "Groebner" - SymbolicsLuxCoreExt = "LuxCore" - SymbolicsPreallocationToolsExt = "PreallocationTools" + SymbolicsLuxExt = "Lux" + SymbolicsNemoExt = "Nemo" + SymbolicsPreallocationToolsExt = ["PreallocationTools", "ForwardDiff"] SymbolicsSymPyExt = "SymPy" [deps.Symbolics.weakdeps] + ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210" Groebner = "0b43b601-686d-58a3-8a1c-6623616c7cd4" - LuxCore = "bb33d45b-7691-41d6-9220-0943567d0623" + Lux = "b2108857-7c20-44ae-9111-449ecde12c47" + Nemo = "2edaba10-b0f1-5616-af89-8c11ac63239a" PreallocationTools = "d236fae5-4411-538c-8e31-a6e3d9e00b46" SymPy = "24249f21-da20-56a4-8eb1-6a02cf4ae2e6" @@ -2628,6 +2861,11 @@ deps = ["ArgTools", "SHA"] uuid = "a4e569a6-e804-4fa4-b0f3-eef7a1d5b13e" version = "1.10.0" +[[deps.TaskLocalValues]] +git-tree-sha1 = "d155450e6dff2a8bc2fcb81dcb194bd98b0aeb46" +uuid = "ed4db957-447d-4319-bfb6-7fa9ae7ecf34" +version = "0.1.2" + [[deps.TensorCore]] deps = ["LinearAlgebra"] git-tree-sha1 = "1feb45f88d133a655e001435632f019a9a1bcdb6" @@ -2635,13 +2873,19 @@ uuid = "62fd8b95-f654-4bbd-a8a5-9c27f68ccd50" version = "0.1.1" [[deps.TermInterface]] -git-tree-sha1 = "6f0cee95e74d1f6891ba6b35b8b219fd3d11b567" +git-tree-sha1 = "d673e0aca9e46a2f63720201f55cc7b3e7169b16" uuid = "8ea1fca8-c5ef-4a55-8b96-4e9afe9c9a3c" -version = "0.4.1" +version = "2.0.0" [[deps.Test]] deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" +version = "1.11.0" + +[[deps.TestItems]] +git-tree-sha1 = "42fd9023fef18b9b78c8343a4e2f3813ffbcefcb" +uuid = "1c621080-faea-4a02-84b6-bbd5e436b8fe" +version = "1.0.0" [[deps.ThreadingUtilities]] deps = ["ManualMemory"] @@ -2651,15 +2895,19 @@ version = "0.5.2" [[deps.TimerOutputs]] deps = ["ExprTools", "Printf"] -git-tree-sha1 = "5a13ae8a41237cff5ecf34f73eb1b8f42fff6531" +git-tree-sha1 = "f57facfd1be61c42321765d3551b3df50f7e09f6" uuid = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f" -version = "0.5.24" +version = "0.5.28" +weakdeps = ["FlameGraphs"] + + [deps.TimerOutputs.extensions] + FlameGraphsExt = "FlameGraphs" [[deps.ToeplitzMatrices]] deps = ["AbstractFFTs", "DSP", "FillArrays", "LinearAlgebra"] -git-tree-sha1 = "05a042dcb3dabaedb4f1c20de0932c34a0fcee76" +git-tree-sha1 = "338d725bd62115be4ba7ffa891d85654e0bfb1a1" uuid = "c751599d-da0a-543b-9d20-d0a503d91d24" -version = "0.8.4" +version = "0.8.5" weakdeps = ["StatsBase"] [deps.ToeplitzMatrices.extensions] @@ -2671,9 +2919,9 @@ uuid = "0796e94c-ce3b-5d07-9a54-7f471281c624" version = "0.5.29" [[deps.TranscodingStreams]] -git-tree-sha1 = "e84b3a11b9bece70d14cce63406bbc79ed3464d2" +git-tree-sha1 = "0c45878dcfdcfa8480052b6ab162cdd138781742" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.11.2" +version = "0.11.3" [[deps.TriangularSolve]] deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "Static", "VectorizationBase"] @@ -2682,9 +2930,9 @@ uuid = "d5829a12-d9aa-46ab-831f-fb7c9ab06edf" version = "0.2.1" [[deps.Tricks]] -git-tree-sha1 = "7822b97e99a1672bfb1b49b668a6d46d58d8cbcb" +git-tree-sha1 = "6cae795a5a9313bbb4f60683f7263318fc7d1505" uuid = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775" -version = "0.1.9" +version = "0.1.10" [[deps.TruncatedStacktraces]] deps = ["InteractiveUtils", "MacroTools", "Preferences"] @@ -2700,6 +2948,7 @@ version = "1.5.1" [[deps.UUIDs]] deps = ["Random", "SHA"] uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4" +version = "1.11.0" [[deps.UnPack]] git-tree-sha1 = "387c1f73762231e86e0c9c5443ce3b4a0a9a0c2b" @@ -2708,6 +2957,7 @@ version = "1.0.2" [[deps.Unicode]] uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5" +version = "1.11.0" [[deps.UnicodeFun]] deps = ["REPL"] @@ -2717,9 +2967,9 @@ version = "0.4.1" [[deps.Unitful]] deps = ["Dates", "LinearAlgebra", "Random"] -git-tree-sha1 = "d95fe458f26209c66a187b1114df96fd70839efd" +git-tree-sha1 = "c0667a8e676c53d390a09dc6870b3d8d6650e2bf" uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" -version = "1.21.0" +version = "1.22.0" weakdeps = ["ConstructionBase", "InverseFunctions"] [deps.Unitful.extensions] @@ -2745,9 +2995,9 @@ version = "0.2.0" [[deps.VectorizationBase]] deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static", "StaticArrayInterface"] -git-tree-sha1 = "e7f5b81c65eb858bed630fe006837b935518aca5" +git-tree-sha1 = "4ab62a49f1d8d9548a1c8d1a75e5f55cf196f64e" uuid = "3d5dd08c-fd9d-11e8-17fa-ed2836048c2f" -version = "0.21.70" +version = "0.21.71" [[deps.VersionParsing]] git-tree-sha1 = "58d6e80b4ee071f5efd07fda82cb9fbe17200868" @@ -2768,15 +3018,15 @@ version = "1.3.243+0" [[deps.Wayland_jll]] deps = ["Artifacts", "EpollShim_jll", "Expat_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg", "XML2_jll"] -git-tree-sha1 = "7558e29847e99bc3f04d6569e82d0f5c54460703" +git-tree-sha1 = "85c7811eddec9e7f22615371c3cc81a504c508ee" uuid = "a2964d1f-97da-50d4-b82a-358c7fce9d89" -version = "1.21.0+1" +version = "1.21.0+2" [[deps.Wayland_protocols_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "93f43ab61b16ddfb2fd3bb13b3ce241cafb0e6c9" +git-tree-sha1 = "5db3e9d307d32baba7067b13fc7b5aa6edd4a19a" uuid = "2381bf8a-dfd0-557d-9999-79630e7b1b91" -version = "1.31.0+0" +version = "1.36.0+0" [[deps.Weave]] deps = ["Base64", "Dates", "Highlights", "JSON", "Markdown", "Mustache", "Pkg", "Printf", "REPL", "RelocatableFolders", "Requires", "Serialization", "YAML"] @@ -2792,21 +3042,21 @@ version = "1.0.0" [[deps.XML2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"] -git-tree-sha1 = "1165b0443d0eca63ac1e32b8c0eb69ed2f4f8127" +git-tree-sha1 = "b8b243e47228b4a3877f1dd6aee0c5d56db7fcf4" uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" -version = "2.13.3+0" +version = "2.13.6+1" [[deps.XSLT_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "XML2_jll", "Zlib_jll"] -git-tree-sha1 = "a54ee957f4c86b526460a720dbc882fa5edcbefc" +git-tree-sha1 = "7d1671acbe47ac88e981868a078bd6b4e27c5191" uuid = "aed1982a-8fda-507f-9586-7b0439959a61" -version = "1.1.41+0" +version = "1.1.42+0" [[deps.XZ_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "ac88fb95ae6447c8dda6a5503f3bafd496ae8632" +git-tree-sha1 = "56c6604ec8b2d82cc4cfe01aa03b00426aac7e1f" uuid = "ffd25f8a-64ca-5728-b0f7-c24cf3aae800" -version = "5.4.6+0" +version = "5.6.4+1" [[deps.Xorg_libICE_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -2822,81 +3072,81 @@ version = "1.2.4+0" [[deps.Xorg_libX11_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libxcb_jll", "Xorg_xtrans_jll"] -git-tree-sha1 = "afead5aba5aa507ad5a3bf01f58f82c8d1403495" +git-tree-sha1 = "9dafcee1d24c4f024e7edc92603cedba72118283" uuid = "4f6342f7-b3d2-589e-9d20-edeb45f2b2bc" -version = "1.8.6+0" +version = "1.8.6+3" [[deps.Xorg_libXau_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "6035850dcc70518ca32f012e46015b9beeda49d8" +git-tree-sha1 = "e9216fdcd8514b7072b43653874fd688e4c6c003" uuid = "0c0b7dd1-d40b-584c-a123-a41640f87eec" -version = "1.0.11+0" +version = "1.0.12+0" [[deps.Xorg_libXcursor_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXfixes_jll", "Xorg_libXrender_jll"] -git-tree-sha1 = "12e0eb3bc634fa2080c1c37fccf56f7c22989afd" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libXfixes_jll", "Xorg_libXrender_jll"] +git-tree-sha1 = "807c226eaf3651e7b2c468f687ac788291f9a89b" uuid = "935fb764-8cf2-53bf-bb30-45bb1f8bf724" -version = "1.2.0+4" +version = "1.2.3+0" [[deps.Xorg_libXdmcp_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "34d526d318358a859d7de23da945578e8e8727b7" +git-tree-sha1 = "89799ae67c17caa5b3b5a19b8469eeee474377db" uuid = "a3789734-cfe1-5b06-b2d0-1dd0d9d62d05" -version = "1.1.4+0" +version = "1.1.5+0" [[deps.Xorg_libXext_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libX11_jll"] -git-tree-sha1 = "d2d1a5c49fae4ba39983f63de6afcbea47194e85" +git-tree-sha1 = "d7155fea91a4123ef59f42c4afb5ab3b4ca95058" uuid = "1082639a-0dae-5f34-9b06-72781eeb8cb3" -version = "1.3.6+0" +version = "1.3.6+3" [[deps.Xorg_libXfixes_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"] -git-tree-sha1 = "0e0dc7431e7a0587559f9294aeec269471c991a4" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libX11_jll"] +git-tree-sha1 = "6fcc21d5aea1a0b7cce6cab3e62246abd1949b86" uuid = "d091e8ba-531a-589c-9de9-94069b037ed8" -version = "5.0.3+4" +version = "6.0.0+0" [[deps.Xorg_libXi_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXext_jll", "Xorg_libXfixes_jll"] -git-tree-sha1 = "89b52bc2160aadc84d707093930ef0bffa641246" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libXext_jll", "Xorg_libXfixes_jll"] +git-tree-sha1 = "984b313b049c89739075b8e2a94407076de17449" uuid = "a51aa0fd-4e3c-5386-b890-e753decda492" -version = "1.7.10+4" +version = "1.8.2+0" [[deps.Xorg_libXinerama_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXext_jll"] -git-tree-sha1 = "26be8b1c342929259317d8b9f7b53bf2bb73b123" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libXext_jll"] +git-tree-sha1 = "a1a7eaf6c3b5b05cb903e35e8372049b107ac729" uuid = "d1454406-59df-5ea1-beac-c340f2130bc3" -version = "1.1.4+4" +version = "1.1.5+0" [[deps.Xorg_libXrandr_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll"] -git-tree-sha1 = "34cea83cb726fb58f325887bf0612c6b3fb17631" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libXext_jll", "Xorg_libXrender_jll"] +git-tree-sha1 = "b6f664b7b2f6a39689d822a6300b14df4668f0f4" uuid = "ec84b674-ba8e-5d96-8ba1-2a689ba10484" -version = "1.5.2+4" +version = "1.5.4+0" [[deps.Xorg_libXrender_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libX11_jll"] -git-tree-sha1 = "47e45cd78224c53109495b3e324df0c37bb61fbe" +git-tree-sha1 = "a490c6212a0e90d2d55111ac956f7c4fa9c277a6" uuid = "ea2f1a96-1ddc-540d-b46f-429655e07cfa" -version = "0.9.11+0" +version = "0.9.11+1" [[deps.Xorg_libpthread_stubs_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "8fdda4c692503d44d04a0603d9ac0982054635f9" +git-tree-sha1 = "c57201109a9e4c0585b208bb408bc41d205ac4e9" uuid = "14d82f49-176c-5ed1-bb49-ad3f5cbd8c74" -version = "0.1.1+0" +version = "0.1.2+0" [[deps.Xorg_libxcb_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "XSLT_jll", "Xorg_libXau_jll", "Xorg_libXdmcp_jll", "Xorg_libpthread_stubs_jll"] -git-tree-sha1 = "bcd466676fef0878338c61e655629fa7bbc69d8e" +git-tree-sha1 = "1a74296303b6524a0472a8cb12d3d87a78eb3612" uuid = "c7cfdc94-dc32-55de-ac96-5a1b8d977c5b" -version = "1.17.0+0" +version = "1.17.0+3" [[deps.Xorg_libxkbfile_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libX11_jll"] -git-tree-sha1 = "730eeca102434283c50ccf7d1ecdadf521a765a4" +git-tree-sha1 = "dbc53e4cf7701c6c7047c51e17d6e64df55dca94" uuid = "cc61e674-0454-545c-8b26-ed2c68acab7a" -version = "1.1.2+0" +version = "1.1.2+1" [[deps.Xorg_xcb_util_cursor_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_xcb_util_image_jll", "Xorg_xcb_util_jll", "Xorg_xcb_util_renderutil_jll"] @@ -2936,9 +3186,9 @@ version = "0.4.1+1" [[deps.Xorg_xkbcomp_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libxkbfile_jll"] -git-tree-sha1 = "330f955bc41bb8f5270a369c473fc4a5a4e4d3cb" +git-tree-sha1 = "ab2221d309eda71020cdda67a973aa582aa85d69" uuid = "35661453-b289-5fab-8a00-3d9160c6a3a4" -version = "1.4.6+0" +version = "1.4.6+1" [[deps.Xorg_xkeyboard_config_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_xkbcomp_jll"] @@ -2948,27 +3198,27 @@ version = "2.39.0+0" [[deps.Xorg_xtrans_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "e92a1a012a10506618f10b7047e478403a046c77" +git-tree-sha1 = "6dba04dbfb72ae3ebe5418ba33d087ba8aa8cb00" uuid = "c5fb5394-a638-5e4d-96e5-b29de1b5cf10" -version = "1.5.0+0" +version = "1.5.1+0" [[deps.YAML]] deps = ["Base64", "Dates", "Printf", "StringEncodings"] -git-tree-sha1 = "dea63ff72079443240fbd013ba006bcbc8a9ac00" +git-tree-sha1 = "b46894beba6c05cd185d174654479aaec09ea6b1" uuid = "ddb6d928-2868-570f-bddf-ab3f9cf99eb6" -version = "0.4.12" +version = "0.4.13" [[deps.ZMQ]] deps = ["FileWatching", "PrecompileTools", "Sockets", "ZeroMQ_jll"] -git-tree-sha1 = "18cfd00df3cbbebf8ea4ec7ea6bbceb3af716bd0" +git-tree-sha1 = "33333bdded3835f81b9b6353da9243dc4ec62e0f" uuid = "c2297ded-f4af-51ae-bb23-16f91089e4e1" -version = "1.3.0" +version = "1.4.0" [[deps.ZeroMQ_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "libsodium_jll"] -git-tree-sha1 = "42f97fb27394378591666ab0e9cee369e6d0e1f9" +git-tree-sha1 = "766d90db2817565b667c1cc9cc420d668f2e8dba" uuid = "8f1865be-045e-5c20-9c9f-bfbfb0764568" -version = "4.3.5+0" +version = "4.3.6+0" [[deps.Zlib_jll]] deps = ["Libdl"] @@ -2977,9 +3227,9 @@ version = "1.2.13+1" [[deps.Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "e678132f07ddb5bfa46857f0d7620fb9be675d3b" +git-tree-sha1 = "446b23e73536f84e8037f5dce465e92275f6a308" uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" -version = "1.5.6+0" +version = "1.5.7+1" [[deps.eudev_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "gperf_jll"] @@ -2989,27 +3239,27 @@ version = "3.2.9+0" [[deps.fzf_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "936081b536ae4aa65415d869287d43ef3cb576b2" +git-tree-sha1 = "6e50f145003024df4f5cb96c7fce79466741d601" uuid = "214eeab7-80f7-51ab-84ad-2988db7cef09" -version = "0.53.0+0" +version = "0.56.3+0" [[deps.gperf_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "3516a5630f741c9eecb3720b1ec9d8edc3ecc033" +git-tree-sha1 = "0ba42241cb6809f1a278d0bcb976e0483c3f1f2d" uuid = "1a1c6b14-54f6-533d-8383-74cd7377aa70" -version = "3.1.1+0" +version = "3.1.1+1" [[deps.libaec_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "46bf7be2917b59b761247be3f317ddf75e50e997" +git-tree-sha1 = "f5733a5a9047722470b95a81e1b172383971105c" uuid = "477f73a3-ac25-53e9-8cc3-50b2fa2566f0" -version = "1.1.2+0" +version = "1.1.3+0" [[deps.libaom_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "1827acba325fdcdf1d2647fc8d5301dd9ba43a9d" +git-tree-sha1 = "522c1df09d05a71785765d19c9524661234738e9" uuid = "a4ae2306-e953-59d6-aa16-d00cac43593b" -version = "3.9.0+0" +version = "3.11.0+0" [[deps.libass_jll]] deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl", "Zlib_jll"] @@ -3020,7 +3270,7 @@ version = "0.15.2+0" [[deps.libblastrampoline_jll]] deps = ["Artifacts", "Libdl"] uuid = "8e850b90-86db-534c-a0d3-1478176c7d93" -version = "5.8.0+1" +version = "5.11.0+0" [[deps.libdecor_jll]] deps = ["Artifacts", "Dbus_jll", "JLLWrappers", "Libdl", "Libglvnd_jll", "Pango_jll", "Wayland_jll", "xkbcommon_jll"] @@ -3048,15 +3298,15 @@ version = "1.18.0+0" [[deps.libpng_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Zlib_jll"] -git-tree-sha1 = "d7015d2e18a5fd9a4f47de711837e980519781a4" +git-tree-sha1 = "068dfe202b0a05b8332f1e8e6b4080684b9c7700" uuid = "b53b4c65-9356-5827-b1ea-8c7a1a84506f" -version = "1.6.43+1" +version = "1.6.47+0" [[deps.libsodium_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "848ab3d00fe39d6fbc2a8641048f8f272af1c51e" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "011b0a7331b41c25524b64dc42afc9683ee89026" uuid = "a9144af2-ca23-56d9-984f-0d03f7b5ccf8" -version = "1.0.20+0" +version = "1.0.21+0" [[deps.libvorbis_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll", "Pkg"] @@ -3073,13 +3323,13 @@ version = "1.1.6+0" [[deps.nghttp2_jll]] deps = ["Artifacts", "Libdl"] uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d" -version = "1.52.0+1" +version = "1.59.0+0" [[deps.oneTBB_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "7d0ea0f4895ef2f5cb83645fa689e52cb55cf493" +git-tree-sha1 = "d5a767a3bb77135a99e433afe0eb14cd7f6914c3" uuid = "1317d2d5-d96f-522e-a858-c73665f53c3e" -version = "2021.12.0+0" +version = "2022.0.0+0" [[deps.p7zip_jll]] deps = ["Artifacts", "Libdl"] @@ -3100,6 +3350,6 @@ version = "3.5.0+0" [[deps.xkbcommon_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Wayland_jll", "Wayland_protocols_jll", "Xorg_libxcb_jll", "Xorg_xkeyboard_config_jll"] -git-tree-sha1 = "9c304562909ab2bab0262639bd4f444d7bc2be37" +git-tree-sha1 = "63406453ed9b33a0df95d570816d5366c92b7809" uuid = "d8fb68d0-12a3-5cfd-a85a-d49703b185fd" -version = "1.4.1+1" +version = "1.4.1+2" diff --git a/benchmarks/StiffODE/Project.toml b/benchmarks/StiffODE/Project.toml index 59bf75ab7..d36aff663 100644 --- a/benchmarks/StiffODE/Project.toml +++ b/benchmarks/StiffODE/Project.toml @@ -35,7 +35,7 @@ LinearSolve = "3" MethodOfLines = "0.11" ModelingToolkit = "9" ODEInterfaceDiffEq = "3.10" -OrdinaryDiffEq = "6.19" +OrdinaryDiffEq = "6.92" ParameterizedFunctions = "5.3" Plots = "1.4" ProfileSVG = "0.2"