Use new physics package

theo-brown · theo-brown · commit defdd6385c95 · 2025-03-05T15:30:05.000Z
diff --git a/torax/transport_model/tglf_based_transport_model.py b/torax/transport_model/tglf_based_transport_model.py
@@ -202,7 +202,7 @@ def _prepare_tglf_inputs(
     # See https://pyrokinetics.readthedocs.io/en/latest/user_guide/collisions.html#tglf
     # Lambda_ee is computed with keV and m^-3 units
     # normalised_nu_ee is computed with SI units (ie J rather than keV)
-    Lambda_ee = physics._calculate_lambda_ee(Te_keV, ne)
+    Lambda_ee = physics.collisions._calculate_lambda_ee(Te_keV, ne)
     normalised_nu_ee = (4 * jnp.pi * ne * CONSTANTS.qe**4 * Lambda_ee) / (
         CONSTANTS.me**0.5 * (2 * Te_J) ** 1.5
     )

Original file line number	Diff line number	Diff line change
`@@ -202,7 +202,7 @@ def _prepare_tglf_inputs(`
`202`	`202`	`# See https://pyrokinetics.readthedocs.io/en/latest/user_guide/collisions.html#tglf`
`203`	`203`	`# Lambda_ee is computed with keV and m^-3 units`
`204`	`204`	`# normalised_nu_ee is computed with SI units (ie J rather than keV)`
`205`		`- Lambda_ee = physics._calculate_lambda_ee(Te_keV, ne)`
	`205`	`+ Lambda_ee = physics.collisions._calculate_lambda_ee(Te_keV, ne)`
`206`	`206`	`normalised_nu_ee = (4 * jnp.pi * ne * CONSTANTS.qe*4 Lambda_ee) / (`
`207`	`207`	`CONSTANTS.me*0.5 (2 * Te_J) ** 1.5`
`208`	`208`	`)`