Allen Institute for Neural Dynamics
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aind-data-schema
aind-data-schema PublicA library that defines AIND data schema and validates JSON.
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aind-ephys-spikesort-kilosort25-full
aind-ephys-spikesort-kilosort25-full PublicCodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.
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aind-ephys-pipeline
aind-ephys-pipeline PublicAIND pipeline for processing extracellular electrophysiology data
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segmentation-skeleton-metrics
segmentation-skeleton-metrics PublicA Python package for evaluating the topological accuracy of a neuron segmentation by computing skeleton-based metrics.
Python 7
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ibl-ephys-alignment-gui
ibl-ephys-alignment-gui PublicForked from int-brain-lab/iblapps
Tool for aligning electrophysiological features to anatomical landmarks
Repositories
- openscope-community-predictive-processing Public
This repository stores bonsai scripts to replicate experiments that are part of the OpenScope predictive processing community project
AllenNeuralDynamics/openscope-community-predictive-processing’s past year of commit activity - dynamic-foraging-task Public
Bonsai/Harp workflow for Dynamic Foraging with Python GUI for visualization and control
AllenNeuralDynamics/dynamic-foraging-task’s past year of commit activity - nmcp-neuroglancer Public Forked from google/neuroglancer
Temporary fork while some required changes are integrated into main repo.
AllenNeuralDynamics/nmcp-neuroglancer’s past year of commit activity - harp.device.cuttlefish-fip Public Forked from AllenNeuralDynamics/harp.device.cuttlefish
an octal, TTL input/output device with programmable square wave output for fiber photometry.
AllenNeuralDynamics/harp.device.cuttlefish-fip’s past year of commit activity
