Intro to High Performance Computing for Life Sciences

University of Texas Southwestern Medical Center

October 13th, 2014, 9:00am - 12:00pm

This class provides beginners and intermediate users with information on using resources at the Texas Advanced Computing Center and hands-on experience managing computational workflows using a Linux command line environment. The interactive lecture will emphasize common strategies used for interacting with clusters and high performance computing resources.

Participants must bring a laptop for the hands-on exercises. Instructions on creating a TACC account and installing required software will be distributed before the class to all registered participants.

Instructors: James Carson and John Fonner

##Agenda

Time	Topic
9:00 - 9:20	Overview of TACC and the user portal
9:20 - 9:40	Shell basics
9:40 - 10:00	File movement and management
10:00 - 10:20	Piping commands and looping
10:20 - 10:40	Coffee break
10:40 - 11:00	Life sciences software and modules
11:00 - 11:20	Job submission and management
11:20 - 11:40	Customizing environment settings
11:40 - 12:00	Catch-up time and questions

jamescarson3/TACCLinuxBasics

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